Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.9□□□□□ -1.95
NKX2-2O95096 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.9□□□□□ -1.95
NKX2-2O95096 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.9□□□□□ -1.95
NKX2-2O95096 AC099654.7-201ENST00000635788 2127 ntBASIC2.9□□□□□ -1.95
NKX2-2O95096 AP003122.5-201ENST00000527668 3766 ntBASIC2.9□□□□□ -1.95
NKX2-2O95096 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
NKX2-2O95096 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.95
NKX2-2O95096 OR4G1P-203ENST00000641984 1631 ntBASIC2.9□□□□□ -1.95
NKX2-2O95096 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NKX2-2O95096 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NKX2-2O95096 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.89□□□□□ -1.95
NKX2-2O95096 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.89□□□□□ -1.95
NKX2-2O95096 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
NKX2-2O95096 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
NKX2-2O95096 Y_RNA.231-201ENST00000364358 102 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 Y_RNA.295-201ENST00000364918 102 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
NKX2-2O95096 Y_RNA.480-201ENST00000384364 102 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 MIR34B-201ENST00000385076 84 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 MIR34A-201ENST00000385130 110 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 OR9R1P-201ENST00000412200 877 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 ARL5AP1-201ENST00000418991 388 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 AC009414.1-201ENST00000427200 443 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 SRIP2-201ENST00000428470 166 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.89□□□□□ -1.95
NKX2-2O95096 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX2-2O95096 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.89□□□□□ -1.95
NKX2-2O95096 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX2-2O95096 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.89□□□□□ -1.95
NKX2-2O95096 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX2-2O95096 BTF3P15-201ENST00000455606 336 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 RN7SL807P-201ENST00000470923 297 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 RPL21P93-201ENST00000480465 489 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.89□□□□□ -1.95
NKX2-2O95096 AC074250.1-201ENST00000511117 192 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX2-2O95096 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.89□□□□□ -1.95
NKX2-2O95096 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NKX2-2O95096 AC090115.3-201ENST00000553218 849 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 MIR3186-201ENST00000577404 85 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.89□□□□□ -1.95
NKX2-2O95096 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.89□□□□□ -1.95
NKX2-2O95096 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NKX2-2O95096 AC004520.1-201ENST00000608362 1413 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 U2.17-201ENST00000611454 95 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.89□□□□□ -1.95
NKX2-2O95096 AC002064.3-201ENST00000623448 346 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 MIR622-201ENST00000638396 96 ntBASIC2.89□□□□□ -1.95
NKX2-2O95096 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.89□□□□□ -1.95
NKX2-2O95096 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NKX2-2O95096 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.88□□□□□ -1.95
NKX2-2O95096 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NKX2-2O95096 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NKX2-2O95096 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
NKX2-2O95096 RNU6-1303P-201ENST00000364841 107 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 RNU4-66P-201ENST00000365199 138 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 RNU6-898P-201ENST00000365627 104 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 RNU6-877P-201ENST00000383868 107 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 RNU6-72P-201ENST00000384285 79 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 SNORD15B-201ENST00000384714 146 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
NKX2-2O95096 RPS4XP7-201ENST00000406274 780 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 AC016831.2-201ENST00000417179 352 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.88□□□□□ -1.95
NKX2-2O95096 AL353678.1-201ENST00000422735 741 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.88□□□□□ -1.95
NKX2-2O95096 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.88□□□□□ -1.95
NKX2-2O95096 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.88□□□□□ -1.95
NKX2-2O95096 RPS27P29-201ENST00000463110 252 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 DYNLL1P5-201ENST00000467158 270 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 RPL21P99-201ENST00000480369 423 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 AC092989.1-201ENST00000481235 277 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.88□□□□□ -1.95
NKX2-2O95096 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.88□□□□□ -1.95
NKX2-2O95096 AC245166.1-201ENST00000521012 253 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 AL118558.2-201ENST00000556294 238 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 AC010525.2-201ENST00000590920 195 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 AC005498.1-201ENST00000592125 465 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NKX2-2O95096 AC107294.3-201ENST00000609211 526 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 AC069200.1-201ENST00000609511 323 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.88□□□□□ -1.95
NKX2-2O95096 RMST_3.1-201ENST00000611651 109 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 AC024614.3-201ENST00000637860 256 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NKX2-2O95096 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
NKX2-2O95096 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
NKX2-2O95096 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
NKX2-2O95096 AC092435.3-201ENST00000565538 3654 ntBASIC2.88□□□□□ -1.95
NKX2-2O95096 AC010889.1-201ENST00000566193 2666 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
NKX2-2O95096 SNORA63.1-201ENST00000362493 131 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 MIR23B-201ENST00000384832 97 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 EI24P2-201ENST00000397776 1076 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 U3.37-201ENST00000408528 213 ntBASIC2.87□□□□□ -1.95
NKX2-2O95096 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.87□□□□□ -1.95
NKX2-2O95096 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.87□□□□□ -1.95
NKX2-2O95096 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms