Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SEMA3DO95025 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.86□□□□□ -2.11
SEMA3DO95025 OR51A5P-201ENST00000415429 942 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 XKRYP1-201ENST00000423438 492 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 RAC1P6-201ENST00000423911 575 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.86□□□□□ -2.11
SEMA3DO95025 RPL30P4-201ENST00000429309 333 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 XKRYP2-201ENST00000432915 492 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 UBE2D3P1-201ENST00000436669 444 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 AL606662.1-201ENST00000445763 553 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.86□□□□□ -2.11
SEMA3DO95025 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.86□□□□□ -2.11
SEMA3DO95025 AC092001.1-201ENST00000453012 261 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.86□□□□□ -2.11
SEMA3DO95025 AC068781.1-201ENST00000488231 618 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.86□□□□□ -2.11
SEMA3DO95025 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.86□□□□□ -2.11
SEMA3DO95025 RPL23AP94-201ENST00000512518 302 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 RNU6-1183P-201ENST00000517054 60 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 RNU6-1003P-201ENST00000517099 105 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.86□□□□□ -2.11
SEMA3DO95025 AC107934.1-201ENST00000522215 217 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.86□□□□□ -2.11
SEMA3DO95025 RPS3AP4-201ENST00000555161 764 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 AC091544.4-201ENST00000555268 342 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.86□□□□□ -2.11
SEMA3DO95025 NRBF2P1-201ENST00000587407 859 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.86□□□□□ -2.11
SEMA3DO95025 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.86□□□□□ -2.11
SEMA3DO95025 AP000811.1-201ENST00000603803 651 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 AC112187.2-201ENST00000604345 283 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 AC027449.1-201ENST00000608890 407 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.86□□□□□ -2.11
SEMA3DO95025 AP002791.1-201ENST00000623291 381 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 AC025048.6-202ENST00000627667 438 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 AC092192.1-201ENST00000633154 1018 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 Z99571.1-201ENST00000636677 394 ntBASIC1.86□□□□□ -2.11
SEMA3DO95025 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SEMA3DO95025 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SEMA3DO95025 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
SEMA3DO95025 SMIM11P1-201ENST00000369586 178 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 Z98749.2-208ENST00000381646 500 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 RPS12P24-201ENST00000412619 387 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.85□□□□□ -2.11
SEMA3DO95025 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.85□□□□□ -2.11
SEMA3DO95025 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.85□□□□□ -2.11
SEMA3DO95025 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.85□□□□□ -2.11
SEMA3DO95025 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.85□□□□□ -2.11
SEMA3DO95025 FABP5P14-201ENST00000437273 393 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.85□□□□□ -2.11
SEMA3DO95025 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.85□□□□□ -2.11
SEMA3DO95025 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.85□□□□□ -2.11
SEMA3DO95025 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.85□□□□□ -2.11
SEMA3DO95025 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.85□□□□□ -2.11
SEMA3DO95025 AP001324.2-201ENST00000461163 319 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 MTND1P3-201ENST00000484956 952 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 RPL39P36-201ENST00000490784 156 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 ANXA2P1-201ENST00000505539 926 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 AC091965.2-201ENST00000512324 613 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.85□□□□□ -2.11
SEMA3DO95025 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.85□□□□□ -2.11
SEMA3DO95025 SNORD19.2-201ENST00000516978 73 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 SCARNA3-201ENST00000517097 143 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 MRPS36P3-201ENST00000519284 130 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.85□□□□□ -2.11
SEMA3DO95025 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.85□□□□□ -2.11
SEMA3DO95025 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.85□□□□□ -2.11
SEMA3DO95025 AL133241.1-201ENST00000556832 487 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 MIR4648-201ENST00000580107 72 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 MIR4765-201ENST00000585007 77 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 BNIP3P9-201ENST00000603714 553 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 AC144521.1-201ENST00000607148 956 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.85□□□□□ -2.11
SEMA3DO95025 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
SEMA3DO95025 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.85□□□□□ -2.11
SEMA3DO95025 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 AC006338.1-201ENST00000618453 749 ntBASIC1.85□□□□□ -2.11
SEMA3DO95025 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SEMA3DO95025 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SEMA3DO95025 RNY4P24-201ENST00000362735 96 ntBASIC1.84□□□□□ -2.11
SEMA3DO95025 RNA5SP125-201ENST00000364843 120 ntBASIC1.84□□□□□ -2.11
SEMA3DO95025 RNU6-19P-201ENST00000384718 107 ntBASIC1.84□□□□□ -2.11
SEMA3DO95025 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SEMA3DO95025 RNA5SP489-201ENST00000410986 109 ntBASIC1.84□□□□□ -2.11
SEMA3DO95025 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.84□□□□□ -2.11
SEMA3DO95025 RPL31P63-201ENST00000422565 375 ntBASIC1.84□□□□□ -2.11
SEMA3DO95025 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.84□□□□□ -2.11
SEMA3DO95025 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.84□□□□□ -2.11
SEMA3DO95025 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.84□□□□□ -2.11
SEMA3DO95025 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.84□□□□□ -2.11
SEMA3DO95025 RPL37P21-201ENST00000435890 276 ntBASIC1.84□□□□□ -2.11
SEMA3DO95025 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.84□□□□□ -2.11
SEMA3DO95025 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.84□□□□□ -2.11
SEMA3DO95025 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.84□□□□□ -2.11
SEMA3DO95025 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.84□□□□□ -2.11
SEMA3DO95025 AC080013.2-201ENST00000460866 323 ntBASIC1.84□□□□□ -2.11
SEMA3DO95025 SNORA25.11-201ENST00000515935 105 ntBASIC1.84□□□□□ -2.11
SEMA3DO95025 AC009902.1-201ENST00000519351 183 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 240.1 ms