Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 AP000852.1-201ENST00000472460 573 ntBASIC4.06□□□□□ -1.76
CLSTN1O94985 RPS27P26-201ENST00000494583 239 ntBASIC4.06□□□□□ -1.76
CLSTN1O94985 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.06□□□□□ -1.76
CLSTN1O94985 AL121579.1-201ENST00000555129 305 ntBASIC4.06□□□□□ -1.76
CLSTN1O94985 MIR4738-201ENST00000579134 87 ntBASIC4.06□□□□□ -1.76
CLSTN1O94985 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.06□□□□□ -1.76
CLSTN1O94985 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CLSTN1O94985 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLSTN1O94985 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLSTN1O94985 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLSTN1O94985 CBX3P1-201ENST00000325243 554 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 RNU6-254P-201ENST00000363377 107 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 SNORA72.1-201ENST00000363485 129 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 SNORD56.5-201ENST00000364281 72 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 SNORA62.3-201ENST00000365110 153 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 RNU6-831P-201ENST00000384548 107 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 Y_RNA.530-201ENST00000384587 101 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 U3.37-201ENST00000408528 213 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 RAB9AP3-201ENST00000412737 573 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.05□□□□□ -1.76
CLSTN1O94985 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.05□□□□□ -1.76
CLSTN1O94985 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.05□□□□□ -1.76
CLSTN1O94985 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.05□□□□□ -1.76
CLSTN1O94985 RPL21P111-201ENST00000418453 477 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 RPL31P12-201ENST00000422587 358 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 RPL35AP12-201ENST00000425362 338 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 AC093151.1-201ENST00000427711 313 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 AL159987.2-201ENST00000432754 307 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 RPL7P12-201ENST00000446719 750 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 AL671855.1-201ENST00000446875 1203 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 AC125238.1-201ENST00000448842 249 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 RAB9AP1-201ENST00000449393 573 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.05□□□□□ -1.76
CLSTN1O94985 PMCHL2-203ENST00000457791 237 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 RNU7-66P-201ENST00000459469 62 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 RPL7P43-201ENST00000478876 753 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLSTN1O94985 AC114781.4-201ENST00000513707 639 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 RNU4-49P-201ENST00000516080 140 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 AC022634.1-201ENST00000520765 532 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 AC118273.2-201ENST00000532092 465 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.05□□□□□ -1.76
CLSTN1O94985 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.05□□□□□ -1.76
CLSTN1O94985 AC037471.2-201ENST00000564941 598 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 AC005730.3-201ENST00000583067 366 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 AL137849.1-201ENST00000604767 169 ntBASIC4.05□□□□□ -1.76
CLSTN1O94985 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
CLSTN1O94985 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.05□□□□□ -1.76
CLSTN1O94985 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLSTN1O94985 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.05□□□□□ -1.76
CLSTN1O94985 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLSTN1O94985 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
CLSTN1O94985 Y_RNA.100-201ENST00000363141 102 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 RNU6-283P-201ENST00000364788 107 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 RNU6-1180P-201ENST00000364935 107 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 RNA5SP424-201ENST00000390988 115 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 AL445584.1-201ENST00000431451 330 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.04□□□□□ -1.76
CLSTN1O94985 AC005019.1-201ENST00000436455 431 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 NDUFA5P4-201ENST00000436704 385 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.04□□□□□ -1.76
CLSTN1O94985 AC084198.1-201ENST00000477747 402 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.04□□□□□ -1.76
CLSTN1O94985 AC116655.1-201ENST00000508324 901 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.04□□□□□ -1.76
CLSTN1O94985 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.04□□□□□ -1.76
CLSTN1O94985 RNU6-1332P-201ENST00000516666 104 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 RNU6-273P-201ENST00000516937 96 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 RNA5SP380-201ENST00000517190 98 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 AC025423.5-201ENST00000550230 219 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.04□□□□□ -1.76
CLSTN1O94985 AC025281.1-201ENST00000567026 265 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 MIR3942-201ENST00000585264 109 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.04□□□□□ -1.76
CLSTN1O94985 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLSTN1O94985 AC005858.4-201ENST00000623191 700 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLSTN1O94985 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.04□□□□□ -1.76
CLSTN1O94985 AC026241.1-201ENST00000517873 2142 ntBASIC4.04□□□□□ -1.76
CLSTN1O94985 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLSTN1O94985 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CLSTN1O94985 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
CLSTN1O94985 SNORD113-7-201ENST00000363762 77 ntBASIC4.03□□□□□ -1.76
CLSTN1O94985 Y_RNA.279-201ENST00000364763 95 ntBASIC4.03□□□□□ -1.76
CLSTN1O94985 RNU1-100P-201ENST00000365255 165 ntBASIC4.03□□□□□ -1.76
CLSTN1O94985 Y_RNA.414-201ENST00000384011 101 ntBASIC4.03□□□□□ -1.76
CLSTN1O94985 MIR184-201ENST00000384962 84 ntBASIC4.03□□□□□ -1.76
CLSTN1O94985 SNORD73A-201ENST00000386062 65 ntBASIC4.03□□□□□ -1.76
CLSTN1O94985 MIR767-201ENST00000390228 109 ntBASIC4.03□□□□□ -1.76
CLSTN1O94985 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CLSTN1O94985 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLSTN1O94985 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.03□□□□□ -1.76
CLSTN1O94985 MTND3P10-201ENST00000450967 341 ntBASIC4.03□□□□□ -1.76
CLSTN1O94985 AC026801.1-201ENST00000497178 464 ntBASIC4.03□□□□□ -1.76
CLSTN1O94985 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.03□□□□□ -1.76
CLSTN1O94985 AC069113.1-201ENST00000517763 267 ntBASIC4.03□□□□□ -1.76
CLSTN1O94985 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.03□□□□□ -1.76
CLSTN1O94985 AC008121.1-201ENST00000603244 268 ntBASIC4.03□□□□□ -1.76
CLSTN1O94985 Z69720.2-201ENST00000624755 279 ntBASIC4.03□□□□□ -1.76
CLSTN1O94985 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms