Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
VAMP4O75379 MIR23B-201ENST00000384832 97 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
VAMP4O75379 RNU6-607P-201ENST00000411283 108 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 EI24P1-201ENST00000416584 867 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VAMP4O75379 USMG5P1-201ENST00000425964 177 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 AP000907.1-201ENST00000428428 510 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 AL160004.2-201ENST00000432935 350 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.42□□□□□ -1.7
VAMP4O75379 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.42□□□□□ -1.7
VAMP4O75379 AL358232.1-201ENST00000448030 501 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 BTF3P15-201ENST00000455606 336 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 AC093663.1-201ENST00000497190 394 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.42□□□□□ -1.7
VAMP4O75379 IGKV2D-23-201ENST00000518179 286 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 AP003122.3-201ENST00000526316 255 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.42□□□□□ -1.7
VAMP4O75379 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.42□□□□□ -1.7
VAMP4O75379 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VAMP4O75379 LRRC37A5P-203ENST00000580181 585 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 AC005899.2-201ENST00000584353 90 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 MIR548AC-201ENST00000585049 88 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 AC011494.1-201ENST00000596454 237 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 AL121655.1-201ENST00000605811 308 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.42□□□□□ -1.7
VAMP4O75379 AL031601.2-202ENST00000622650 282 ntBASIC4.42□□□□□ -1.7
VAMP4O75379 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.42□□□□□ -1.7
VAMP4O75379 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
VAMP4O75379 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
VAMP4O75379 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.42□□□□□ -1.7
VAMP4O75379 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VAMP4O75379 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VAMP4O75379 ZNF807-201ENST00000328088 1707 ntBASIC4.41□□□□□ -1.7
VAMP4O75379 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VAMP4O75379 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VAMP4O75379 DEFB108F-201ENST00000344638 222 ntBASIC4.41□□□□□ -1.7
VAMP4O75379 RNU6-173P-201ENST00000364215 104 ntBASIC4.41□□□□□ -1.7
VAMP4O75379 RNU6-1329P-201ENST00000365664 107 ntBASIC4.41□□□□□ -1.7
VAMP4O75379 RNU6-629P-201ENST00000384061 103 ntBASIC4.41□□□□□ -1.7
VAMP4O75379 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.41□□□□□ -1.7
VAMP4O75379 MIR548F4-201ENST00000408515 105 ntBASIC4.41□□□□□ -1.7
VAMP4O75379 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.41□□□□□ -1.7
VAMP4O75379 AL353621.1-201ENST00000418219 243 ntBASIC4.41□□□□□ -1.7
VAMP4O75379 AC097713.2-201ENST00000430199 356 ntBASIC4.41□□□□□ -1.7
VAMP4O75379 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.41□□□□□ -1.7
VAMP4O75379 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.41□□□□□ -1.7
VAMP4O75379 RPS4XP2-201ENST00000458402 793 ntBASIC4.41□□□□□ -1.7
VAMP4O75379 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.41□□□□□ -1.7
VAMP4O75379 AC026784.1-201ENST00000507986 352 ntBASIC4.41□□□□□ -1.7
VAMP4O75379 MTND3P25-201ENST00000509243 135 ntBASIC4.41□□□□□ -1.7
VAMP4O75379 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.41□□□□□ -1.7
VAMP4O75379 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.41□□□□□ -1.7
VAMP4O75379 MTCO2P24-201ENST00000515611 426 ntBASIC4.41□□□□□ -1.7
VAMP4O75379 RNU6-307P-201ENST00000516743 106 ntBASIC4.41□□□□□ -1.7
VAMP4O75379 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
VAMP4O75379 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.41□□□□□ -1.7
VAMP4O75379 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.41□□□□□ -1.7
VAMP4O75379 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.41□□□□□ -1.7
VAMP4O75379 FAM60BP-201ENST00000578364 658 ntBASIC4.41□□□□□ -1.7
VAMP4O75379 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.41□□□□□ -1.7
VAMP4O75379 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.41□□□□□ -1.7
VAMP4O75379 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.41□□□□□ -1.7
VAMP4O75379 AL133383.2-201ENST00000622958 2336 ntBASIC4.41□□□□□ -1.7
VAMP4O75379 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
VAMP4O75379 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
VAMP4O75379 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.4□□□□□ -1.7
VAMP4O75379 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.4□□□□□ -1.7
VAMP4O75379 AC005183.1-201ENST00000603687 1979 ntBASIC4.4□□□□□ -1.7
VAMP4O75379 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.4□□□□□ -1.7
VAMP4O75379 UBE2L2-201ENST00000254302 429 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VAMP4O75379 RNU5A-1-201ENST00000362698 116 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 RNU6-1303P-201ENST00000364841 107 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 RNY1P14-201ENST00000384426 108 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 SNORA41-201ENST00000384675 132 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 MIR578-201ENST00000384828 96 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 HSPE1P26-201ENST00000405341 275 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 Y_RNA.605-201ENST00000410577 105 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.4□□□□□ -1.71
VAMP4O75379 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.4□□□□□ -1.71
VAMP4O75379 AC063979.1-201ENST00000415539 377 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 AL451062.2-201ENST00000427515 271 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 USP9YP30-201ENST00000430729 455 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 MTCYBP9-201ENST00000431021 303 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.4□□□□□ -1.71
VAMP4O75379 SNRPGP3-201ENST00000469405 227 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 RPL21P13-201ENST00000488305 481 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.4□□□□□ -1.71
VAMP4O75379 AC008716.1-201ENST00000511084 513 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 RNU6-764P-201ENST00000516396 105 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.4□□□□□ -1.71
VAMP4O75379 AC010653.1-201ENST00000571108 881 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 AL391261.4-201ENST00000616012 481 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 AC007485.1-201ENST00000616755 206 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 AC087588.2-201ENST00000617667 426 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 MIR7975-201ENST00000619350 68 ntBASIC4.4□□□□□ -1.71
VAMP4O75379 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
VAMP4O75379 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VAMP4O75379 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms