Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 MIR626-201ENST00000385032 94 ntBASIC5.44□□□□□ -1.54
RNF40O75150 RNU6ATAC19P-201ENST00000408096 110 ntBASIC5.44□□□□□ -1.54
RNF40O75150 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF40O75150 AC079780.1-201ENST00000428259 207 ntBASIC5.44□□□□□ -1.54
RNF40O75150 AL049745.1-201ENST00000433953 286 ntBASIC5.44□□□□□ -1.54
RNF40O75150 AC112220.1-201ENST00000434628 355 ntBASIC5.44□□□□□ -1.54
RNF40O75150 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF40O75150 PPIAP21-201ENST00000464473 501 ntBASIC5.44□□□□□ -1.54
RNF40O75150 RPL30P12-201ENST00000474666 353 ntBASIC5.44□□□□□ -1.54
RNF40O75150 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.44□□□□□ -1.54
RNF40O75150 RPL31P13-201ENST00000484151 370 ntBASIC5.44□□□□□ -1.54
RNF40O75150 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF40O75150 AL671862.1-201ENST00000515851 349 ntBASIC5.44□□□□□ -1.54
RNF40O75150 RN7SKP122-201ENST00000515923 296 ntBASIC5.44□□□□□ -1.54
RNF40O75150 SCARNA8-201ENST00000515924 131 ntBASIC5.44□□□□□ -1.54
RNF40O75150 RN7SKP46-201ENST00000515942 234 ntBASIC5.44□□□□□ -1.54
RNF40O75150 RNU6-1198P-201ENST00000516904 67 ntBASIC5.44□□□□□ -1.54
RNF40O75150 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF40O75150 MIR3646-201ENST00000578301 84 ntBASIC5.44□□□□□ -1.54
RNF40O75150 AC011447.4-201ENST00000587562 111 ntBASIC5.44□□□□□ -1.54
RNF40O75150 MIR8069-1-201ENST00000616627 86 ntBASIC5.44□□□□□ -1.54
RNF40O75150 AL591926.4-201ENST00000616895 298 ntBASIC5.44□□□□□ -1.54
RNF40O75150 MIR8069-2-201ENST00000621412 86 ntBASIC5.44□□□□□ -1.54
RNF40O75150 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
RNF40O75150 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF40O75150 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF40O75150 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
RNF40O75150 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF40O75150 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RNF40O75150 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF40O75150 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF40O75150 SALL4P2-201ENST00000423288 2910 ntBASIC5.43□□□□□ -1.54
RNF40O75150 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
RNF40O75150 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RNF40O75150 RN7SKP104-201ENST00000362605 328 ntBASIC5.43□□□□□ -1.54
RNF40O75150 RNA5SP123-201ENST00000363244 119 ntBASIC5.43□□□□□ -1.54
RNF40O75150 RNU6-801P-201ENST00000364087 105 ntBASIC5.43□□□□□ -1.54
RNF40O75150 RNU6-1074P-201ENST00000383995 104 ntBASIC5.43□□□□□ -1.54
RNF40O75150 RNA5SP31-201ENST00000411144 127 ntBASIC5.43□□□□□ -1.54
RNF40O75150 ELOCP21-201ENST00000412558 336 ntBASIC5.43□□□□□ -1.54
RNF40O75150 DDX39BP1-205ENST00000422507 192 ntBASIC5.43□□□□□ -1.54
RNF40O75150 NDUFB4P7-201ENST00000423198 363 ntBASIC5.43□□□□□ -1.54
RNF40O75150 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.43□□□□□ -1.54
RNF40O75150 AC092754.1-201ENST00000472975 479 ntBASIC5.43□□□□□ -1.54
RNF40O75150 MTND5P34-201ENST00000568888 325 ntBASIC5.43□□□□□ -1.54
RNF40O75150 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF40O75150 AL773545.4-201ENST00000637262 310 ntBASIC5.43□□□□□ -1.54
RNF40O75150 AL513478.4-201ENST00000641636 310 ntBASIC5.43□□□□□ -1.54
RNF40O75150 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF40O75150 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RNF40O75150 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF40O75150 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF40O75150 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF40O75150 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF40O75150 CUL1P1-201ENST00000509510 2425 ntBASIC5.43□□□□□ -1.54
RNF40O75150 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF40O75150 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF40O75150 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF40O75150 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
RNF40O75150 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF40O75150 RNU6-527P-201ENST00000363425 104 ntBASIC5.42□□□□□ -1.54
RNF40O75150 RNU4-10P-201ENST00000364383 140 ntBASIC5.42□□□□□ -1.54
RNF40O75150 RNU6-146P-201ENST00000384602 108 ntBASIC5.42□□□□□ -1.54
RNF40O75150 SNORA40.5-201ENST00000391061 128 ntBASIC5.42□□□□□ -1.54
RNF40O75150 SNORD37.2-201ENST00000391075 66 ntBASIC5.42□□□□□ -1.54
RNF40O75150 AC009963.1-201ENST00000417265 157 ntBASIC5.42□□□□□ -1.54
RNF40O75150 RPS29P22-201ENST00000472363 168 ntBASIC5.42□□□□□ -1.54
RNF40O75150 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.42□□□□□ -1.54
RNF40O75150 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF40O75150 AL121603.1-201ENST00000553815 142 ntBASIC5.42□□□□□ -1.54
RNF40O75150 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF40O75150 AL356157.2-201ENST00000605122 111 ntBASIC5.42□□□□□ -1.54
RNF40O75150 AC083809.1-201ENST00000615051 472 ntBASIC5.42□□□□□ -1.54
RNF40O75150 AC013791.1-201ENST00000616619 62 ntBASIC5.42□□□□□ -1.54
RNF40O75150 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF40O75150 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF40O75150 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF40O75150 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF40O75150 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF40O75150 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF40O75150 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
RNF40O75150 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF40O75150 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF40O75150 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF40O75150 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF40O75150 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF40O75150 AC005332.5-201ENST00000591222 2919 ntBASIC5.41□□□□□ -1.54
RNF40O75150 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF40O75150 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF40O75150 SNURFL-201ENST00000309296 343 ntBASIC5.41□□□□□ -1.54
RNF40O75150 RNU6-942P-201ENST00000363002 107 ntBASIC5.41□□□□□ -1.54
RNF40O75150 RNU6-407P-201ENST00000365280 104 ntBASIC5.41□□□□□ -1.54
RNF40O75150 Y_RNA.369-201ENST00000365568 117 ntBASIC5.41□□□□□ -1.54
RNF40O75150 RNU6-142P-201ENST00000384019 107 ntBASIC5.41□□□□□ -1.54
RNF40O75150 MIR589-201ENST00000385238 99 ntBASIC5.41□□□□□ -1.54
RNF40O75150 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RNF40O75150 SNORA26.5-201ENST00000391215 123 ntBASIC5.41□□□□□ -1.54
RNF40O75150 U3.37-201ENST00000408528 213 ntBASIC5.41□□□□□ -1.54
RNF40O75150 AC006461.1-201ENST00000412637 326 ntBASIC5.41□□□□□ -1.54
RNF40O75150 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms