Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNA5SP137-201ENST00000516833 135 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.72□□□□□ -2.13
SHOX2O60902 AL133153.1-201ENST00000557756 303 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 SUB1P3-201ENST00000564581 315 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 AC012435.1-202ENST00000568772 240 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 VN1R83P-201ENST00000595685 445 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 VN1R80P-201ENST00000597126 338 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 AC009233.1-201ENST00000616477 371 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 AC123767.1-202ENST00000620407 817 ntBASIC1.72□□□□□ -2.13
SHOX2O60902 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.72□□□□□ -2.13
SHOX2O60902 Z75746.1-201ENST00000440243 2080 ntBASIC1.71□□□□□ -2.13
SHOX2O60902 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
SHOX2O60902 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SHOX2O60902 RNU6-560P-201ENST00000364007 108 ntBASIC1.71□□□□□ -2.14
SHOX2O60902 NDUFS5P1-201ENST00000405668 289 ntBASIC1.71□□□□□ -2.14
SHOX2O60902 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.71□□□□□ -2.14
SHOX2O60902 AC097463.2-201ENST00000421074 142 ntBASIC1.71□□□□□ -2.14
SHOX2O60902 RPL7P34-201ENST00000433316 712 ntBASIC1.71□□□□□ -2.14
SHOX2O60902 AL121594.1-201ENST00000475906 575 ntBASIC1.71□□□□□ -2.14
SHOX2O60902 RPL38P4-201ENST00000502376 214 ntBASIC1.71□□□□□ -2.14
SHOX2O60902 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.71□□□□□ -2.14
SHOX2O60902 AC068790.3-201ENST00000602988 553 ntBASIC1.71□□□□□ -2.14
SHOX2O60902 AC005034.5-201ENST00000604219 466 ntBASIC1.71□□□□□ -2.14
SHOX2O60902 AL355297.2-201ENST00000604792 129 ntBASIC1.71□□□□□ -2.14
SHOX2O60902 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.71□□□□□ -2.14
SHOX2O60902 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.71□□□□□ -2.14
SHOX2O60902 AL109620.1-201ENST00000618738 1197 ntBASIC1.71□□□□□ -2.14
SHOX2O60902 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SHOX2O60902 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SHOX2O60902 RNU6-289P-201ENST00000364093 107 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 RNU6-853P-201ENST00000364306 107 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 MIR320A-201ENST00000385302 82 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 AL359634.1-202ENST00000404721 284 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.7□□□□□ -2.14
SHOX2O60902 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.7□□□□□ -2.14
SHOX2O60902 AL353621.1-201ENST00000418219 243 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 HMGB1P27-201ENST00000431429 603 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.7□□□□□ -2.14
SHOX2O60902 RPL23AP76-201ENST00000441860 458 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 MTATP6P30-201ENST00000443540 664 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 RPL23AP3-201ENST00000453844 468 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 RNU7-59P-201ENST00000459101 61 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 RPL36AP48-201ENST00000485521 314 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.7□□□□□ -2.14
SHOX2O60902 SMURF2P1-201ENST00000514992 481 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.7□□□□□ -2.14
SHOX2O60902 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.7□□□□□ -2.14
SHOX2O60902 PSMA3P-201ENST00000555485 635 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 AC090079.2-201ENST00000575289 768 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 AC021171.1-201ENST00000603137 706 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 AL078603.1-201ENST00000603824 313 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
SHOX2O60902 AC068700.1-201ENST00000565862 3754 ntBASIC1.7□□□□□ -2.14
SHOX2O60902 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SHOX2O60902 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SHOX2O60902 ZNF702P-202ENST00000434269 1966 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 UBE2L2-201ENST00000254302 429 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 Y_RNA.311-201ENST00000365068 96 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
SHOX2O60902 BTF3P4-201ENST00000418852 495 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 AC104651.1-201ENST00000427559 735 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.69□□□□□ -2.14
SHOX2O60902 AL360221.1-201ENST00000445989 335 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 MTND1P16-201ENST00000465177 898 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.69□□□□□ -2.14
SHOX2O60902 AC096745.1-201ENST00000509945 370 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 AC008837.2-201ENST00000513076 418 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 RNA5SP216-201ENST00000516111 123 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.69□□□□□ -2.14
SHOX2O60902 AP004607.1-201ENST00000524456 203 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.69□□□□□ -2.14
SHOX2O60902 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.69□□□□□ -2.14
SHOX2O60902 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.69□□□□□ -2.14
SHOX2O60902 MTND3P13-201ENST00000574391 343 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.69□□□□□ -2.14
SHOX2O60902 BNIP3P23-201ENST00000599655 511 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 AC073544.2-201ENST00000601155 540 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.69□□□□□ -2.14
SHOX2O60902 AC068620.3-201ENST00000602749 560 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 AC007038.2-201ENST00000608095 740 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 AC092574.1-201ENST00000609771 420 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.69□□□□□ -2.14
SHOX2O60902 AL158163.2-201ENST00000619110 700 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 AC091953.2-201ENST00000623979 160 ntBASIC1.69□□□□□ -2.14
SHOX2O60902 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.69□□□□□ -2.14
SHOX2O60902 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.69□□□□□ -2.14
SHOX2O60902 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
SHOX2O60902 RNA5SP88-201ENST00000365560 109 ntBASIC1.68□□□□□ -2.14
SHOX2O60902 AL139397.2-201ENST00000404529 772 ntBASIC1.68□□□□□ -2.14
SHOX2O60902 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.68□□□□□ -2.14
SHOX2O60902 XKRYP1-201ENST00000423438 492 ntBASIC1.68□□□□□ -2.14
SHOX2O60902 XKRYP2-201ENST00000432915 492 ntBASIC1.68□□□□□ -2.14
SHOX2O60902 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.68□□□□□ -2.14
SHOX2O60902 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SHOX2O60902 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.68□□□□□ -2.14
SHOX2O60902 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.68□□□□□ -2.14
SHOX2O60902 AL353689.1-201ENST00000438895 199 ntBASIC1.68□□□□□ -2.14
SHOX2O60902 MTCO1P53-201ENST00000441633 699 ntBASIC1.68□□□□□ -2.14
SHOX2O60902 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.68□□□□□ -2.14
SHOX2O60902 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms