Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 AC112220.3-201ENST00000605502 502 ntBASIC1.68□□□□□ -2.14
GMDSO60547 AC091965.5-201ENST00000624785 342 ntBASIC1.68□□□□□ -2.14
GMDSO60547 AL512643.1-201ENST00000635735 524 ntBASIC1.68□□□□□ -2.14
GMDSO60547 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
GMDSO60547 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.68□□□□□ -2.14
GMDSO60547 RNA5SP126-201ENST00000365092 109 ntBASIC1.67□□□□□ -2.14
GMDSO60547 RNU6-14P-201ENST00000384630 106 ntBASIC1.67□□□□□ -2.14
GMDSO60547 MIR29C-201ENST00000385231 88 ntBASIC1.67□□□□□ -2.14
GMDSO60547 RNU2-2P-201ENST00000410396 191 ntBASIC1.67□□□□□ -2.14
GMDSO60547 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
GMDSO60547 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.67□□□□□ -2.14
GMDSO60547 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.67□□□□□ -2.14
GMDSO60547 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.67□□□□□ -2.14
GMDSO60547 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.67□□□□□ -2.14
GMDSO60547 MTND2P29-201ENST00000438595 412 ntBASIC1.67□□□□□ -2.14
GMDSO60547 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.67□□□□□ -2.14
GMDSO60547 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.67□□□□□ -2.14
GMDSO60547 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.67□□□□□ -2.14
GMDSO60547 AC245102.2-201ENST00000448956 180 ntBASIC1.67□□□□□ -2.14
GMDSO60547 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.67□□□□□ -2.14
GMDSO60547 PPP1R2P5-201ENST00000457256 603 ntBASIC1.67□□□□□ -2.14
GMDSO60547 MTAPP1-201ENST00000489154 819 ntBASIC1.67□□□□□ -2.14
GMDSO60547 RPL38P4-201ENST00000502376 214 ntBASIC1.67□□□□□ -2.14
GMDSO60547 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
GMDSO60547 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.67□□□□□ -2.14
GMDSO60547 MTCYBP43-201ENST00000513621 740 ntBASIC1.67□□□□□ -2.14
GMDSO60547 SNORA31.19-201ENST00000517079 126 ntBASIC1.67□□□□□ -2.14
GMDSO60547 AC009902.1-201ENST00000519351 183 ntBASIC1.67□□□□□ -2.14
GMDSO60547 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
GMDSO60547 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.67□□□□□ -2.14
GMDSO60547 AP001981.2-201ENST00000603241 418 ntBASIC1.67□□□□□ -2.14
GMDSO60547 SNRPGP19-201ENST00000603826 189 ntBASIC1.67□□□□□ -2.14
GMDSO60547 AL358072.1-201ENST00000604156 575 ntBASIC1.67□□□□□ -2.14
GMDSO60547 AC021646.1-201ENST00000605469 484 ntBASIC1.67□□□□□ -2.14
GMDSO60547 AC106052.1-201ENST00000608029 497 ntBASIC1.67□□□□□ -2.14
GMDSO60547 U2.15-201ENST00000611544 191 ntBASIC1.67□□□□□ -2.14
GMDSO60547 U2.16-201ENST00000613119 191 ntBASIC1.67□□□□□ -2.14
GMDSO60547 AC022202.1-201ENST00000613515 211 ntBASIC1.67□□□□□ -2.14
GMDSO60547 U2.12-201ENST00000613778 191 ntBASIC1.67□□□□□ -2.14
GMDSO60547 U2.20-201ENST00000613956 192 ntBASIC1.67□□□□□ -2.14
GMDSO60547 U2.9-201ENST00000615427 191 ntBASIC1.67□□□□□ -2.14
GMDSO60547 U2.11-201ENST00000616345 191 ntBASIC1.67□□□□□ -2.14
GMDSO60547 U2.2-201ENST00000616535 191 ntBASIC1.67□□□□□ -2.14
GMDSO60547 U2.3-201ENST00000617785 191 ntBASIC1.67□□□□□ -2.14
GMDSO60547 U2.19-201ENST00000618602 191 ntBASIC1.67□□□□□ -2.14
GMDSO60547 RNU2-1-201ENST00000618664 191 ntBASIC1.67□□□□□ -2.14
GMDSO60547 U2.6-201ENST00000619225 191 ntBASIC1.67□□□□□ -2.14
GMDSO60547 U2.5-201ENST00000619465 191 ntBASIC1.67□□□□□ -2.14
GMDSO60547 U2.10-201ENST00000620268 191 ntBASIC1.67□□□□□ -2.14
GMDSO60547 YWHAEP7-203ENST00000622054 312 ntBASIC1.67□□□□□ -2.14
GMDSO60547 Z99571.1-201ENST00000636677 394 ntBASIC1.67□□□□□ -2.14
GMDSO60547 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.67□□□□□ -2.14
GMDSO60547 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
GMDSO60547 RNY4P24-201ENST00000362735 96 ntBASIC1.66□□□□□ -2.14
GMDSO60547 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
GMDSO60547 RNU1-57P-201ENST00000384491 166 ntBASIC1.66□□□□□ -2.14
GMDSO60547 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.66□□□□□ -2.14
GMDSO60547 RNU2-62P-201ENST00000410868 191 ntBASIC1.66□□□□□ -2.14
GMDSO60547 VPS26BP1-201ENST00000417155 755 ntBASIC1.66□□□□□ -2.14
GMDSO60547 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.66□□□□□ -2.14
GMDSO60547 RPS3AP37-201ENST00000419176 745 ntBASIC1.66□□□□□ -2.14
GMDSO60547 EIF1AXP1-201ENST00000419267 435 ntBASIC1.66□□□□□ -2.14
GMDSO60547 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.66□□□□□ -2.14
GMDSO60547 TXNL1P1-201ENST00000429528 554 ntBASIC1.66□□□□□ -2.14
GMDSO60547 AL591704.1-201ENST00000432574 275 ntBASIC1.66□□□□□ -2.14
GMDSO60547 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.66□□□□□ -2.14
GMDSO60547 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.66□□□□□ -2.14
GMDSO60547 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.66□□□□□ -2.14
GMDSO60547 RPL7P43-201ENST00000478876 753 ntBASIC1.66□□□□□ -2.14
GMDSO60547 RPS29P21-201ENST00000496272 170 ntBASIC1.66□□□□□ -2.14
GMDSO60547 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.66□□□□□ -2.14
GMDSO60547 RNU6-586P-201ENST00000517265 104 ntBASIC1.66□□□□□ -2.14
GMDSO60547 AC109329.1-201ENST00000518744 317 ntBASIC1.66□□□□□ -2.14
GMDSO60547 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.66□□□□□ -2.14
GMDSO60547 AP005639.2-201ENST00000527592 928 ntBASIC1.66□□□□□ -2.14
GMDSO60547 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.66□□□□□ -2.14
GMDSO60547 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.66□□□□□ -2.14
GMDSO60547 RPL30P11-203ENST00000598995 310 ntBASIC1.66□□□□□ -2.14
GMDSO60547 ELOCP5-201ENST00000604924 333 ntBASIC1.66□□□□□ -2.14
GMDSO60547 AC018638.7-201ENST00000605836 1114 ntBASIC1.66□□□□□ -2.14
GMDSO60547 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.66□□□□□ -2.14
GMDSO60547 AC006386.1-201ENST00000619436 415 ntBASIC1.66□□□□□ -2.14
GMDSO60547 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.66□□□□□ -2.14
GMDSO60547 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.65□□□□□ -2.14
GMDSO60547 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.65□□□□□ -2.15
GMDSO60547 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
GMDSO60547 RNA5SP88-201ENST00000365560 109 ntBASIC1.65□□□□□ -2.15
GMDSO60547 MIR518D-201ENST00000385014 87 ntBASIC1.65□□□□□ -2.15
GMDSO60547 SNORA40C-201ENST00000391285 128 ntBASIC1.65□□□□□ -2.15
GMDSO60547 AC138623.1-201ENST00000418060 216 ntBASIC1.65□□□□□ -2.15
GMDSO60547 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.65□□□□□ -2.15
GMDSO60547 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.65□□□□□ -2.15
GMDSO60547 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.65□□□□□ -2.15
GMDSO60547 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.65□□□□□ -2.15
GMDSO60547 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
GMDSO60547 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.65□□□□□ -2.15
GMDSO60547 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.65□□□□□ -2.15
GMDSO60547 RPL7P18-201ENST00000478965 734 ntBASIC1.65□□□□□ -2.15
GMDSO60547 AC018868.1-201ENST00000491307 315 ntBASIC1.65□□□□□ -2.15
GMDSO60547 AC109927.2-201ENST00000506416 303 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms