Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MIR4448-201ENST00000584360 86 ntBASIC1.91□□□□□ -2.1
RNF13O43567 AP000860.1-201ENST00000605250 559 ntBASIC1.91□□□□□ -2.1
RNF13O43567 AC013244.3-201ENST00000605614 388 ntBASIC1.91□□□□□ -2.1
RNF13O43567 AL391813.2-201ENST00000609113 322 ntBASIC1.91□□□□□ -2.1
RNF13O43567 AC103710.2-201ENST00000609912 942 ntBASIC1.91□□□□□ -2.1
RNF13O43567 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.91□□□□□ -2.1
RNF13O43567 AC022202.1-201ENST00000613515 211 ntBASIC1.91□□□□□ -2.1
RNF13O43567 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
RNF13O43567 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
RNF13O43567 CENPCP1-201ENST00000533085 2578 ntBASIC1.91□□□□□ -2.1
RNF13O43567 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RNF13O43567 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.9□□□□□ -2.1
RNF13O43567 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.9□□□□□ -2.1
RNF13O43567 AP006437.1-201ENST00000641440 3685 ntBASIC1.9□□□□□ -2.11
RNF13O43567 HSPE1P11-201ENST00000339579 310 ntBASIC1.9□□□□□ -2.11
RNF13O43567 SNORD114-19-201ENST00000363072 75 ntBASIC1.9□□□□□ -2.11
RNF13O43567 RNU6-960P-201ENST00000364056 120 ntBASIC1.9□□□□□ -2.11
RNF13O43567 Y_RNA.302-201ENST00000364997 102 ntBASIC1.9□□□□□ -2.11
RNF13O43567 RNU6-190P-201ENST00000384154 102 ntBASIC1.9□□□□□ -2.11
RNF13O43567 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.9□□□□□ -2.11
RNF13O43567 MTND1P32-201ENST00000433043 938 ntBASIC1.9□□□□□ -2.11
RNF13O43567 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.9□□□□□ -2.11
RNF13O43567 DNAJC19P4-201ENST00000440115 345 ntBASIC1.9□□□□□ -2.11
RNF13O43567 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.9□□□□□ -2.11
RNF13O43567 AL118520.1-201ENST00000450770 291 ntBASIC1.9□□□□□ -2.11
RNF13O43567 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.9□□□□□ -2.11
RNF13O43567 AC093899.1-201ENST00000457984 376 ntBASIC1.9□□□□□ -2.11
RNF13O43567 HMGB1P35-201ENST00000503360 598 ntBASIC1.9□□□□□ -2.11
RNF13O43567 UBE2V1P12-201ENST00000503954 474 ntBASIC1.9□□□□□ -2.11
RNF13O43567 MRPS17P9-201ENST00000511924 393 ntBASIC1.9□□□□□ -2.11
RNF13O43567 RNU2-10P-201ENST00000516375 211 ntBASIC1.9□□□□□ -2.11
RNF13O43567 AP002770.2-201ENST00000543613 532 ntBASIC1.9□□□□□ -2.11
RNF13O43567 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.9□□□□□ -2.11
RNF13O43567 AC026464.5-201ENST00000562497 722 ntBASIC1.9□□□□□ -2.11
RNF13O43567 AC026271.5-201ENST00000577873 130 ntBASIC1.9□□□□□ -2.11
RNF13O43567 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RNF13O43567 AC002984.1-201ENST00000591692 448 ntBASIC1.9□□□□□ -2.11
RNF13O43567 BNIP3P40-201ENST00000596017 556 ntBASIC1.9□□□□□ -2.11
RNF13O43567 NDUFA8P1-201ENST00000605525 367 ntBASIC1.9□□□□□ -2.11
RNF13O43567 AC018638.7-201ENST00000605836 1114 ntBASIC1.9□□□□□ -2.11
RNF13O43567 AC130324.3-201ENST00000614165 542 ntBASIC1.9□□□□□ -2.11
RNF13O43567 AC010378.1-201ENST00000619270 362 ntBASIC1.9□□□□□ -2.11
RNF13O43567 AC092656.1-203ENST00000624134 423 ntBASIC1.9□□□□□ -2.11
RNF13O43567 ZNF702P-202ENST00000434269 1966 ntBASIC1.9□□□□□ -2.11
RNF13O43567 AC092104.1-201ENST00000497346 1441 ntBASIC1.9□□□□□ -2.11
RNF13O43567 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RNF13O43567 U3.13-201ENST00000364804 214 ntBASIC1.89□□□□□ -2.11
RNF13O43567 RPS20P2-201ENST00000402520 389 ntBASIC1.89□□□□□ -2.11
RNF13O43567 AL591034.2-201ENST00000402839 359 ntBASIC1.89□□□□□ -2.11
RNF13O43567 GSTA9P-201ENST00000406231 611 ntBASIC1.89□□□□□ -2.11
RNF13O43567 RNA5SP450-201ENST00000411206 102 ntBASIC1.89□□□□□ -2.11
RNF13O43567 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.89□□□□□ -2.11
RNF13O43567 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.89□□□□□ -2.11
RNF13O43567 AC096920.1-201ENST00000423991 241 ntBASIC1.89□□□□□ -2.11
RNF13O43567 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.89□□□□□ -2.11
RNF13O43567 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.89□□□□□ -2.11
RNF13O43567 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.89□□□□□ -2.11
RNF13O43567 PMCHL2-203ENST00000457791 237 ntBASIC1.89□□□□□ -2.11
RNF13O43567 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.89□□□□□ -2.11
RNF13O43567 MED28P2-201ENST00000475771 317 ntBASIC1.89□□□□□ -2.11
RNF13O43567 AC109329.1-201ENST00000518744 317 ntBASIC1.89□□□□□ -2.11
RNF13O43567 AC123904.2-201ENST00000548059 300 ntBASIC1.89□□□□□ -2.11
RNF13O43567 AC005034.5-201ENST00000604219 466 ntBASIC1.89□□□□□ -2.11
RNF13O43567 AL139418.1-201ENST00000613613 177 ntBASIC1.89□□□□□ -2.11
RNF13O43567 MIR6852-201ENST00000621699 66 ntBASIC1.89□□□□□ -2.11
RNF13O43567 AC091932.3-201ENST00000624223 323 ntBASIC1.89□□□□□ -2.11
RNF13O43567 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RNF13O43567 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RNF13O43567 ZNF29P-201ENST00000225587 168 ntBASIC1.88□□□□□ -2.11
RNF13O43567 RNU6-1010P-201ENST00000362757 107 ntBASIC1.88□□□□□ -2.11
RNF13O43567 RNU1-23P-201ENST00000363361 144 ntBASIC1.88□□□□□ -2.11
RNF13O43567 RNU6-946P-201ENST00000383878 107 ntBASIC1.88□□□□□ -2.11
RNF13O43567 RNU1-57P-201ENST00000384491 166 ntBASIC1.88□□□□□ -2.11
RNF13O43567 MIR518A2-201ENST00000384966 87 ntBASIC1.88□□□□□ -2.11
RNF13O43567 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RNF13O43567 AL135786.1-201ENST00000415892 214 ntBASIC1.88□□□□□ -2.11
RNF13O43567 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.88□□□□□ -2.11
RNF13O43567 AL356320.1-201ENST00000429616 163 ntBASIC1.88□□□□□ -2.11
RNF13O43567 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.88□□□□□ -2.11
RNF13O43567 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.88□□□□□ -2.11
RNF13O43567 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.88□□□□□ -2.11
RNF13O43567 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.88□□□□□ -2.11
RNF13O43567 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RNF13O43567 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.88□□□□□ -2.11
RNF13O43567 AC008413.1-201ENST00000511864 177 ntBASIC1.88□□□□□ -2.11
RNF13O43567 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.88□□□□□ -2.11
RNF13O43567 AP001004.1-201ENST00000582468 324 ntBASIC1.88□□□□□ -2.11
RNF13O43567 RPL30P11-203ENST00000598995 310 ntBASIC1.88□□□□□ -2.11
RNF13O43567 AC073410.2-201ENST00000603240 332 ntBASIC1.88□□□□□ -2.11
RNF13O43567 AC009314.1-201ENST00000603871 304 ntBASIC1.88□□□□□ -2.11
RNF13O43567 MIR15A-201ENST00000607334 83 ntBASIC1.88□□□□□ -2.11
RNF13O43567 AC098657.3-201ENST00000620434 263 ntBASIC1.88□□□□□ -2.11
RNF13O43567 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.88□□□□□ -2.11
RNF13O43567 MIR3529-201ENST00000637713 78 ntBASIC1.88□□□□□ -2.11
RNF13O43567 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RNF13O43567 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
RNF13O43567 HAUS6P2-201ENST00000433254 2404 ntBASIC1.87□□□□□ -2.11
RNF13O43567 MIR449A-201ENST00000362113 91 ntBASIC1.87□□□□□ -2.11
RNF13O43567 RNU5E-1-201ENST00000362477 120 ntBASIC1.87□□□□□ -2.11
RNF13O43567 RNU6-487P-201ENST00000365430 104 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms