Protein–RNA interactions for Protein: O43310

CTIF, CBP80/20-dependent translation initiation factor, humanhuman

Known RBP Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTIFO43310 AC104136.1-201ENST00000512969 394 ntBASIC3.44□□□□□ -1.86
CTIFO43310 RNU4-49P-201ENST00000516080 140 ntBASIC3.44□□□□□ -1.86
CTIFO43310 Y_RNA.665-201ENST00000516177 98 ntBASIC3.44□□□□□ -1.86
CTIFO43310 RNU6-277P-201ENST00000516272 106 ntBASIC3.44□□□□□ -1.86
CTIFO43310 SNORA70.18-201ENST00000516696 98 ntBASIC3.44□□□□□ -1.86
CTIFO43310 RNU6-1315P-201ENST00000517187 99 ntBASIC3.44□□□□□ -1.86
CTIFO43310 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.44□□□□□ -1.86
CTIFO43310 CASP1P1-201ENST00000526345 212 ntBASIC3.44□□□□□ -1.86
CTIFO43310 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.44□□□□□ -1.86
CTIFO43310 AC011611.1-201ENST00000552179 197 ntBASIC3.44□□□□□ -1.86
CTIFO43310 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.44□□□□□ -1.86
CTIFO43310 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.44□□□□□ -1.86
CTIFO43310 MTCO3P13-201ENST00000577757 781 ntBASIC3.44□□□□□ -1.86
CTIFO43310 MIR5692A1-201ENST00000580523 69 ntBASIC3.44□□□□□ -1.86
CTIFO43310 MIR4742-201ENST00000581069 85 ntBASIC3.44□□□□□ -1.86
CTIFO43310 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.44□□□□□ -1.86
CTIFO43310 AC243960.4-201ENST00000600532 288 ntBASIC3.44□□□□□ -1.86
CTIFO43310 AL050343.2-201ENST00000607338 280 ntBASIC3.44□□□□□ -1.86
CTIFO43310 AC004832.5-201ENST00000608677 401 ntBASIC3.44□□□□□ -1.86
CTIFO43310 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.44□□□□□ -1.86
CTIFO43310 RMST_7.1-201ENST00000621935 268 ntBASIC3.44□□□□□ -1.86
CTIFO43310 AP003400.5-201ENST00000624827 617 ntBASIC3.44□□□□□ -1.86
CTIFO43310 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.44□□□□□ -1.86
CTIFO43310 TPTEP1-208ENST00000636884 213 ntBASIC3.44□□□□□ -1.86
CTIFO43310 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
CTIFO43310 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.44□□□□□ -1.86
CTIFO43310 AC093908.1-201ENST00000623125 8092 ntBASIC3.44□□□□□ -1.86
CTIFO43310 CUL1P1-201ENST00000509510 2425 ntBASIC3.43□□□□□ -1.86
CTIFO43310 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CTIFO43310 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CTIFO43310 Y_RNA.100-201ENST00000363141 102 ntBASIC3.43□□□□□ -1.86
CTIFO43310 RNU6-522P-201ENST00000364497 107 ntBASIC3.43□□□□□ -1.86
CTIFO43310 MIR634-201ENST00000385208 97 ntBASIC3.43□□□□□ -1.86
CTIFO43310 MTND3P8-201ENST00000412909 339 ntBASIC3.43□□□□□ -1.86
CTIFO43310 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.43□□□□□ -1.86
CTIFO43310 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.43□□□□□ -1.86
CTIFO43310 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.43□□□□□ -1.86
CTIFO43310 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.43□□□□□ -1.86
CTIFO43310 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.43□□□□□ -1.86
CTIFO43310 AL590639.1-201ENST00000456484 337 ntBASIC3.43□□□□□ -1.86
CTIFO43310 RPL21P41-201ENST00000459863 264 ntBASIC3.43□□□□□ -1.86
CTIFO43310 AC012181.1-201ENST00000479895 423 ntBASIC3.43□□□□□ -1.86
CTIFO43310 Y_RNA.654-201ENST00000497848 106 ntBASIC3.43□□□□□ -1.86
CTIFO43310 SUMO2P6-201ENST00000505273 288 ntBASIC3.43□□□□□ -1.86
CTIFO43310 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.43□□□□□ -1.86
CTIFO43310 RNU6-1282P-201ENST00000516735 96 ntBASIC3.43□□□□□ -1.86
CTIFO43310 Y_RNA.701-201ENST00000516812 110 ntBASIC3.43□□□□□ -1.86
CTIFO43310 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.43□□□□□ -1.86
CTIFO43310 PSMA3P-201ENST00000555485 635 ntBASIC3.43□□□□□ -1.86
CTIFO43310 AL118558.2-201ENST00000556294 238 ntBASIC3.43□□□□□ -1.86
CTIFO43310 AL355375.2-201ENST00000574825 175 ntBASIC3.43□□□□□ -1.86
CTIFO43310 MIR1273C-201ENST00000578669 77 ntBASIC3.43□□□□□ -1.86
CTIFO43310 AC092807.2-201ENST00000609367 243 ntBASIC3.43□□□□□ -1.86
CTIFO43310 AC069200.1-201ENST00000609511 323 ntBASIC3.43□□□□□ -1.86
CTIFO43310 U2.17-201ENST00000611454 95 ntBASIC3.43□□□□□ -1.86
CTIFO43310 uc_338.5-201ENST00000611839 155 ntBASIC3.43□□□□□ -1.86
CTIFO43310 AC107871.2-201ENST00000612894 502 ntBASIC3.43□□□□□ -1.86
CTIFO43310 MIR1302-1-201ENST00000637932 143 ntBASIC3.43□□□□□ -1.86
CTIFO43310 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.43□□□□□ -1.86
CTIFO43310 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.43□□□□□ -1.86
CTIFO43310 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.43□□□□□ -1.86
CTIFO43310 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CTIFO43310 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.42□□□□□ -1.86
CTIFO43310 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CTIFO43310 ZNF807-201ENST00000328088 1707 ntBASIC3.42□□□□□ -1.86
CTIFO43310 Y_RNA.378-201ENST00000365652 113 ntBASIC3.42□□□□□ -1.86
CTIFO43310 RNU6-510P-201ENST00000391239 108 ntBASIC3.42□□□□□ -1.86
CTIFO43310 FAT1P1-201ENST00000406588 507 ntBASIC3.42□□□□□ -1.86
CTIFO43310 RN7SKP111-201ENST00000410349 271 ntBASIC3.42□□□□□ -1.86
CTIFO43310 CECR9-201ENST00000453421 199 ntBASIC3.42□□□□□ -1.86
CTIFO43310 AC233279.1-201ENST00000455300 423 ntBASIC3.42□□□□□ -1.86
CTIFO43310 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.42□□□□□ -1.86
CTIFO43310 RNA5SP310-201ENST00000459084 116 ntBASIC3.42□□□□□ -1.86
CTIFO43310 RNU6-1208P-201ENST00000459588 107 ntBASIC3.42□□□□□ -1.86
CTIFO43310 AC006483.1-201ENST00000487308 313 ntBASIC3.42□□□□□ -1.86
CTIFO43310 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.42□□□□□ -1.86
CTIFO43310 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.42□□□□□ -1.86
CTIFO43310 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.42□□□□□ -1.86
CTIFO43310 RPL7P20-201ENST00000520308 745 ntBASIC3.42□□□□□ -1.86
CTIFO43310 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.42□□□□□ -1.86
CTIFO43310 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
CTIFO43310 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.42□□□□□ -1.86
CTIFO43310 MIR548AC-201ENST00000585049 88 ntBASIC3.42□□□□□ -1.86
CTIFO43310 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.42□□□□□ -1.86
CTIFO43310 AC084757.4-201ENST00000616350 526 ntBASIC3.42□□□□□ -1.86
CTIFO43310 AC027309.3-201ENST00000623419 351 ntBASIC3.42□□□□□ -1.86
CTIFO43310 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.42□□□□□ -1.86
CTIFO43310 AL353746.1-201ENST00000566293 6881 ntBASIC3.42□□□□□ -1.86
CTIFO43310 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CTIFO43310 AP003122.5-201ENST00000527668 3766 ntBASIC3.41□□□□□ -1.86
CTIFO43310 AL359693.1-201ENST00000614959 2407 ntBASIC3.41□□□□□ -1.86
CTIFO43310 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CTIFO43310 Y_RNA.67-201ENST00000362870 100 ntBASIC3.41□□□□□ -1.86
CTIFO43310 RNU6-371P-201ENST00000364283 108 ntBASIC3.41□□□□□ -1.86
CTIFO43310 Y_RNA.394-201ENST00000383942 103 ntBASIC3.41□□□□□ -1.86
CTIFO43310 Y_RNA.399-201ENST00000383955 105 ntBASIC3.41□□□□□ -1.86
CTIFO43310 RNU6-831P-201ENST00000384548 107 ntBASIC3.41□□□□□ -1.86
CTIFO43310 SNORA16.2-201ENST00000390991 127 ntBASIC3.41□□□□□ -1.86
CTIFO43310 AL356057.2-201ENST00000403318 432 ntBASIC3.41□□□□□ -1.86
CTIFO43310 POLHP1-201ENST00000411806 470 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms