Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
SRGAP3O43295 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SRGAP3O43295 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SRGAP3O43295 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SRGAP3O43295 RNU6-1155P-201ENST00000363554 107 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 Y_RNA.151-201ENST00000363566 112 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 Y_RNA.152-201ENST00000363578 100 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 Y_RNA.210-201ENST00000364161 110 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 Y_RNA.314-201ENST00000365114 102 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SRGAP3O43295 DEFB109C-201ENST00000382575 264 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 DEFB109B-201ENST00000382656 264 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 RNU6-842P-201ENST00000384269 107 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 MIR1183-201ENST00000408856 89 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 BX842559.1-201ENST00000419615 532 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.33□□□□□ -1.72
SRGAP3O43295 AC008264.1-201ENST00000447612 367 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 AL358232.1-201ENST00000448030 501 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 RNU7-138P-201ENST00000459479 64 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.33□□□□□ -1.72
SRGAP3O43295 RPL22P13-201ENST00000493291 347 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 AC105758.1-201ENST00000506038 399 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 RNU6-475P-201ENST00000516073 104 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.33□□□□□ -1.72
SRGAP3O43295 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.33□□□□□ -1.72
SRGAP3O43295 OR4H12P-201ENST00000556269 907 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.33□□□□□ -1.72
SRGAP3O43295 MIR4738-201ENST00000579134 87 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 SDR42E1P2-201ENST00000614861 481 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 U7.8-201ENST00000619968 63 ntBASIC4.33□□□□□ -1.72
SRGAP3O43295 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SRGAP3O43295 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SRGAP3O43295 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SRGAP3O43295 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SRGAP3O43295 Y_RNA.396-201ENST00000383949 103 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 Y_RNA.489-201ENST00000384410 101 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 RNU6-14P-201ENST00000384630 106 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 SNORA41-201ENST00000384675 132 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 RNU6-713P-201ENST00000384761 107 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 MIR183-201ENST00000384958 110 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SRGAP3O43295 RNU2-43P-201ENST00000410306 190 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SRGAP3O43295 UBE2V1P4-201ENST00000425374 344 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 YME1L1P1-201ENST00000429435 297 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.32□□□□□ -1.72
SRGAP3O43295 RPL37P6-201ENST00000460682 294 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 RNU6-1095P-201ENST00000516148 108 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.32□□□□□ -1.72
SRGAP3O43295 AC126177.3-201ENST00000551839 688 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.32□□□□□ -1.72
SRGAP3O43295 MIR4644-201ENST00000579929 84 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 AL355297.3-201ENST00000604082 446 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 AC107871.2-201ENST00000612894 502 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.32□□□□□ -1.72
SRGAP3O43295 AC022149.2-201ENST00000621061 203 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 U6.105-201ENST00000637379 88 ntBASIC4.32□□□□□ -1.72
SRGAP3O43295 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SRGAP3O43295 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SRGAP3O43295 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
SRGAP3O43295 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SRGAP3O43295 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SRGAP3O43295 RNU6-1249P-201ENST00000363237 111 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 Y_RNA.257-201ENST00000364596 102 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 Y_RNA.480-201ENST00000384364 102 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 RNU6-178P-201ENST00000384631 104 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 RNU2-3P-201ENST00000410144 191 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 RNU6-712P-201ENST00000410558 100 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.31□□□□□ -1.72
SRGAP3O43295 RPL21P90-201ENST00000415692 466 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 PPP1R11P2-201ENST00000423543 382 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 AL159987.2-201ENST00000432754 307 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 AL645568.3-201ENST00000433683 316 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 AC090774.1-201ENST00000435925 246 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 RPS24P13-201ENST00000442520 397 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 FTH1P25-201ENST00000447665 469 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 AC112492.4-201ENST00000456549 352 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 RPL21P41-201ENST00000459863 264 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.31□□□□□ -1.72
SRGAP3O43295 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SRGAP3O43295 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.31□□□□□ -1.72
SRGAP3O43295 AC069113.1-201ENST00000517763 267 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 ERHP1-201ENST00000523006 310 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.31□□□□□ -1.72
SRGAP3O43295 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.31□□□□□ -1.72
SRGAP3O43295 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.31□□□□□ -1.72
SRGAP3O43295 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SRGAP3O43295 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.31□□□□□ -1.72
SRGAP3O43295 RNU6-85P-201ENST00000605989 107 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 MIR15A-201ENST00000607334 83 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 U73479.1-201ENST00000618062 168 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 AC015967.1-201ENST00000619893 476 ntBASIC4.31□□□□□ -1.72
SRGAP3O43295 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.31□□□□□ -1.72
SRGAP3O43295 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.31□□□□□ -1.72
SRGAP3O43295 AC008725.1-201ENST00000605123 2263 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SRGAP3O43295 Y_RNA.380-201ENST00000365663 111 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 SNORD73A-201ENST00000386062 65 ntBASIC4.3□□□□□ -1.72
SRGAP3O43295 RNU6-817P-201ENST00000391083 104 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms