Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 SNORD115-47-201ENST00000391226 86 ntBASIC2.48□□□□□ -2.01
PHF1O43189 RPL21P75-201ENST00000396599 483 ntBASIC2.48□□□□□ -2.01
PHF1O43189 RPL21P28-201ENST00000401418 483 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AL592114.1-201ENST00000403842 483 ntBASIC2.48□□□□□ -2.01
PHF1O43189 BTF3P7-201ENST00000407097 488 ntBASIC2.48□□□□□ -2.01
PHF1O43189 RNU2-9P-201ENST00000410194 145 ntBASIC2.48□□□□□ -2.01
PHF1O43189 RNU6-387P-201ENST00000411331 105 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AC114491.1-201ENST00000416095 246 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AL513477.1-202ENST00000417061 214 ntBASIC2.48□□□□□ -2.01
PHF1O43189 RPL7P10-201ENST00000417407 739 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.48□□□□□ -2.01
PHF1O43189 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PHF1O43189 TMEM167AP1-201ENST00000423409 219 ntBASIC2.48□□□□□ -2.01
PHF1O43189 MRPS10P2-201ENST00000431226 381 ntBASIC2.48□□□□□ -2.01
PHF1O43189 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.48□□□□□ -2.01
PHF1O43189 AL606489.2-201ENST00000433886 234 ntBASIC2.48□□□□□ -2.01
PHF1O43189 RPL7P54-201ENST00000438336 674 ntBASIC2.48□□□□□ -2.01
PHF1O43189 HMGB1P18-201ENST00000438801 619 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AC073415.1-201ENST00000449240 153 ntBASIC2.48□□□□□ -2.01
PHF1O43189 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.48□□□□□ -2.01
PHF1O43189 RPL21P39-201ENST00000463605 483 ntBASIC2.48□□□□□ -2.01
PHF1O43189 RPL21P93-201ENST00000480465 489 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AC233702.1-201ENST00000482905 502 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AC087190.1-201ENST00000484462 480 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AL049874.1-201ENST00000489560 388 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AC093591.1-201ENST00000491435 481 ntBASIC2.48□□□□□ -2.01
PHF1O43189 RPL21P16-201ENST00000495531 483 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AC083906.5-201ENST00000503722 328 ntBASIC2.48□□□□□ -2.01
PHF1O43189 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.48□□□□□ -2.01
PHF1O43189 SCGB1D5P-201ENST00000515134 247 ntBASIC2.48□□□□□ -2.01
PHF1O43189 RN7SKP219-201ENST00000516825 296 ntBASIC2.48□□□□□ -2.01
PHF1O43189 RNU6-685P-201ENST00000517088 95 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.48□□□□□ -2.01
PHF1O43189 AC008752.3-201ENST00000588113 712 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.48□□□□□ -2.01
PHF1O43189 AC020895.1-201ENST00000595362 272 ntBASIC2.48□□□□□ -2.01
PHF1O43189 DPPA3P3-201ENST00000603842 430 ntBASIC2.48□□□□□ -2.01
PHF1O43189 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.48□□□□□ -2.01
PHF1O43189 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.48□□□□□ -2.01
PHF1O43189 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AC034102.8-201ENST00000615146 484 ntBASIC2.48□□□□□ -2.01
PHF1O43189 uc_338.11-201ENST00000619132 160 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AC007318.2-201ENST00000620999 243 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AC011155.2-201ENST00000623202 216 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.48□□□□□ -2.01
PHF1O43189 FER-210ENST00000628534 558 ntTSL 5 BASIC2.48□□□□□ -2.01
PHF1O43189 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.48□□□□□ -2.01
PHF1O43189 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PHF1O43189 AC008568.2-201ENST00000623862 2313 ntBASIC2.48□□□□□ -2.01
PHF1O43189 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.48□□□□□ -2.01
PHF1O43189 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
PHF1O43189 AC099654.7-201ENST00000635788 2127 ntBASIC2.48□□□□□ -2.01
PHF1O43189 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.48□□□□□ -2.01
PHF1O43189 AC138915.1-201ENST00000565427 1685 ntBASIC2.47□□□□□ -2.01
PHF1O43189 AC073325.2-201ENST00000339545 159 ntBASIC2.47□□□□□ -2.01
PHF1O43189 RNU6-534P-201ENST00000364877 106 ntBASIC2.47□□□□□ -2.01
PHF1O43189 SNORD115-7-201ENST00000365306 82 ntBASIC2.47□□□□□ -2.01
PHF1O43189 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
PHF1O43189 MIR196B-201ENST00000384852 84 ntBASIC2.47□□□□□ -2.01
PHF1O43189 RNA5SP492-201ENST00000411330 114 ntBASIC2.47□□□□□ -2.01
PHF1O43189 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.47□□□□□ -2.01
PHF1O43189 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.47□□□□□ -2.01
PHF1O43189 AC003685.2-201ENST00000422795 395 ntBASIC2.47□□□□□ -2.01
PHF1O43189 AL356867.1-201ENST00000429623 299 ntBASIC2.47□□□□□ -2.01
PHF1O43189 MTND1P2-201ENST00000430604 821 ntBASIC2.47□□□□□ -2.01
PHF1O43189 MYL8P-204ENST00000431574 518 ntBASIC2.47□□□□□ -2.01
PHF1O43189 NEFMP1-201ENST00000443423 1006 ntBASIC2.47□□□□□ -2.01
PHF1O43189 UBBP3-201ENST00000445497 241 ntBASIC2.47□□□□□ -2.01
PHF1O43189 CBWD4P-201ENST00000445695 655 ntBASIC2.47□□□□□ -2.01
PHF1O43189 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.47□□□□□ -2.01
PHF1O43189 MTND1P18-201ENST00000448191 573 ntBASIC2.47□□□□□ -2.01
PHF1O43189 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.47□□□□□ -2.01
PHF1O43189 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.47□□□□□ -2.01
PHF1O43189 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.47□□□□□ -2.01
PHF1O43189 RNU7-182P-201ENST00000459009 62 ntBASIC2.47□□□□□ -2.01
PHF1O43189 snoU13.26-201ENST00000459452 105 ntBASIC2.47□□□□□ -2.01
PHF1O43189 FAM92A1P2-202ENST00000504766 877 ntBASIC2.47□□□□□ -2.01
PHF1O43189 AC009901.1-201ENST00000506703 541 ntBASIC2.47□□□□□ -2.01
PHF1O43189 AC008413.1-201ENST00000511864 177 ntBASIC2.47□□□□□ -2.01
PHF1O43189 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.47□□□□□ -2.01
PHF1O43189 RNU6-390P-201ENST00000516259 103 ntBASIC2.47□□□□□ -2.01
PHF1O43189 Y_RNA.704-201ENST00000516851 102 ntBASIC2.47□□□□□ -2.01
PHF1O43189 HSPE1P20-201ENST00000538133 289 ntBASIC2.47□□□□□ -2.01
PHF1O43189 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.47□□□□□ -2.01
PHF1O43189 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.47□□□□□ -2.01
PHF1O43189 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.47□□□□□ -2.01
PHF1O43189 AL162413.1-201ENST00000603198 110 ntBASIC2.47□□□□□ -2.01
PHF1O43189 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.47□□□□□ -2.01
PHF1O43189 AC025034.2-201ENST00000623264 286 ntBASIC2.47□□□□□ -2.01
PHF1O43189 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.47□□□□□ -2.01
PHF1O43189 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PHF1O43189 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.47□□□□□ -2.01
PHF1O43189 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.46□□□□□ -2.01
PHF1O43189 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
PHF1O43189 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PHF1O43189 RNU6-451P-201ENST00000362921 107 ntBASIC2.46□□□□□ -2.02
PHF1O43189 Y_RNA.89-201ENST00000363031 102 ntBASIC2.46□□□□□ -2.02
PHF1O43189 RNU6-179P-201ENST00000363350 107 ntBASIC2.46□□□□□ -2.02
PHF1O43189 RNY3P3-201ENST00000363816 102 ntBASIC2.46□□□□□ -2.02
PHF1O43189 SNORA62.1-201ENST00000364287 154 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms