Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC130324.3-201ENST00000614165 542 ntBASIC2.25□□□□□ -2.05
MSH4O15457 MIR7843-201ENST00000622274 79 ntBASIC2.25□□□□□ -2.05
MSH4O15457 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.25□□□□□ -2.05
MSH4O15457 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
MSH4O15457 AC093536.2-201ENST00000565257 1406 ntBASIC2.25□□□□□ -2.05
MSH4O15457 ZNF355P-201ENST00000427301 3216 ntBASIC2.25□□□□□ -2.05
MSH4O15457 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
MSH4O15457 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.24□□□□□ -2.05
MSH4O15457 CKAP2P1-201ENST00000555477 2049 ntBASIC2.24□□□□□ -2.05
MSH4O15457 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.24□□□□□ -2.05
MSH4O15457 RNU6-960P-201ENST00000364056 120 ntBASIC2.24□□□□□ -2.05
MSH4O15457 RNU5E-5P-201ENST00000365379 116 ntBASIC2.24□□□□□ -2.05
MSH4O15457 RNU6-946P-201ENST00000383878 107 ntBASIC2.24□□□□□ -2.05
MSH4O15457 RNU6-190P-201ENST00000384154 102 ntBASIC2.24□□□□□ -2.05
MSH4O15457 Y_RNA.560-201ENST00000384689 102 ntBASIC2.24□□□□□ -2.05
MSH4O15457 MIR301A-201ENST00000385261 86 ntBASIC2.24□□□□□ -2.05
MSH4O15457 MRPL42P2-201ENST00000403169 426 ntBASIC2.24□□□□□ -2.05
MSH4O15457 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.24□□□□□ -2.05
MSH4O15457 MIR1289-2-201ENST00000408360 111 ntBASIC2.24□□□□□ -2.05
MSH4O15457 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.24□□□□□ -2.05
MSH4O15457 AC092809.3-201ENST00000415453 231 ntBASIC2.24□□□□□ -2.05
MSH4O15457 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
MSH4O15457 AC119618.1-201ENST00000434191 222 ntBASIC2.24□□□□□ -2.05
MSH4O15457 BRK1P2-201ENST00000442875 223 ntBASIC2.24□□□□□ -2.05
MSH4O15457 USP9YP12-201ENST00000450481 570 ntBASIC2.24□□□□□ -2.05
MSH4O15457 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.24□□□□□ -2.05
MSH4O15457 AC025033.1-201ENST00000463883 194 ntBASIC2.24□□□□□ -2.05
MSH4O15457 RPL30P6-201ENST00000475925 342 ntBASIC2.24□□□□□ -2.05
MSH4O15457 NDUFB4P2-201ENST00000509515 391 ntBASIC2.24□□□□□ -2.05
MSH4O15457 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
MSH4O15457 RNU7-51P-201ENST00000516560 62 ntBASIC2.24□□□□□ -2.05
MSH4O15457 RNA5SP82-201ENST00000516707 92 ntBASIC2.24□□□□□ -2.05
MSH4O15457 RNU6-232P-201ENST00000517144 64 ntBASIC2.24□□□□□ -2.05
MSH4O15457 AC009902.1-201ENST00000519351 183 ntBASIC2.24□□□□□ -2.05
MSH4O15457 MIR4782-201ENST00000577987 79 ntBASIC2.24□□□□□ -2.05
MSH4O15457 MIR3199-1-201ENST00000582434 88 ntBASIC2.24□□□□□ -2.05
MSH4O15457 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
MSH4O15457 AC018638.7-201ENST00000605836 1114 ntBASIC2.24□□□□□ -2.05
MSH4O15457 RNU6-87P-201ENST00000607561 108 ntBASIC2.24□□□□□ -2.05
MSH4O15457 AC009159.2-201ENST00000617603 606 ntBASIC2.24□□□□□ -2.05
MSH4O15457 AC092140.2-201ENST00000618027 521 ntBASIC2.24□□□□□ -2.05
MSH4O15457 PISRT1-201ENST00000626175 531 ntBASIC2.24□□□□□ -2.05
MSH4O15457 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
MSH4O15457 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.24□□□□□ -2.05
MSH4O15457 MTND4P27-201ENST00000450813 1354 ntBASIC2.23□□□□□ -2.05
MSH4O15457 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
MSH4O15457 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
MSH4O15457 AP000568.1-201ENST00000282964 442 ntBASIC2.23□□□□□ -2.05
MSH4O15457 Y_RNA.534-201ENST00000384599 112 ntBASIC2.23□□□□□ -2.05
MSH4O15457 RNU6-1072P-201ENST00000384703 107 ntBASIC2.23□□□□□ -2.05
MSH4O15457 RNU6-19P-201ENST00000384718 107 ntBASIC2.23□□□□□ -2.05
MSH4O15457 RNU6-443P-201ENST00000384780 107 ntBASIC2.23□□□□□ -2.05
MSH4O15457 MIR218-1-201ENST00000384999 110 ntBASIC2.23□□□□□ -2.05
MSH4O15457 MIR504-201ENST00000385065 83 ntBASIC2.23□□□□□ -2.05
MSH4O15457 MIR147B-201ENST00000390185 80 ntBASIC2.23□□□□□ -2.05
MSH4O15457 RNU6-920P-201ENST00000410926 92 ntBASIC2.23□□□□□ -2.05
MSH4O15457 USP9YP6-201ENST00000413550 854 ntBASIC2.23□□□□□ -2.05
MSH4O15457 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.23□□□□□ -2.05
MSH4O15457 OR51A5P-201ENST00000415429 942 ntBASIC2.23□□□□□ -2.05
MSH4O15457 MTND4P20-201ENST00000424125 869 ntBASIC2.23□□□□□ -2.05
MSH4O15457 MTND5P25-201ENST00000430499 799 ntBASIC2.23□□□□□ -2.05
MSH4O15457 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.23□□□□□ -2.05
MSH4O15457 COX6CP12-201ENST00000446748 202 ntBASIC2.23□□□□□ -2.05
MSH4O15457 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.23□□□□□ -2.05
MSH4O15457 AC092001.1-201ENST00000453012 261 ntBASIC2.23□□□□□ -2.05
MSH4O15457 RNU7-26P-201ENST00000458980 63 ntBASIC2.23□□□□□ -2.05
MSH4O15457 BZW1P2-201ENST00000473537 826 ntBASIC2.23□□□□□ -2.05
MSH4O15457 MTAPP1-201ENST00000489154 819 ntBASIC2.23□□□□□ -2.05
MSH4O15457 AC010587.1-201ENST00000505809 469 ntBASIC2.23□□□□□ -2.05
MSH4O15457 AC023141.11-201ENST00000508864 202 ntBASIC2.23□□□□□ -2.05
MSH4O15457 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.23□□□□□ -2.05
MSH4O15457 RNU6-581P-201ENST00000516214 105 ntBASIC2.23□□□□□ -2.05
MSH4O15457 RNU6-572P-201ENST00000516724 80 ntBASIC2.23□□□□□ -2.05
MSH4O15457 RNU6-914P-201ENST00000516749 109 ntBASIC2.23□□□□□ -2.05
MSH4O15457 AC025755.1-201ENST00000521306 278 ntBASIC2.23□□□□□ -2.05
MSH4O15457 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.23□□□□□ -2.05
MSH4O15457 PRELID2P1-201ENST00000552837 301 ntBASIC2.23□□□□□ -2.05
MSH4O15457 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.23□□□□□ -2.05
MSH4O15457 MYL12BP1-201ENST00000569826 507 ntBASIC2.23□□□□□ -2.05
MSH4O15457 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
MSH4O15457 MIR4658-201ENST00000584344 65 ntBASIC2.23□□□□□ -2.05
MSH4O15457 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.23□□□□□ -2.05
MSH4O15457 AC008121.1-201ENST00000603244 268 ntBASIC2.23□□□□□ -2.05
MSH4O15457 AC009314.1-201ENST00000603871 304 ntBASIC2.23□□□□□ -2.05
MSH4O15457 AL022161.1-201ENST00000604390 213 ntBASIC2.23□□□□□ -2.05
MSH4O15457 AC138749.5-201ENST00000611461 208 ntBASIC2.23□□□□□ -2.05
MSH4O15457 AC116165.2-201ENST00000616705 206 ntBASIC2.23□□□□□ -2.05
MSH4O15457 AL449363.1-201ENST00000617815 186 ntBASIC2.23□□□□□ -2.05
MSH4O15457 AC009878.1-201ENST00000621819 340 ntBASIC2.23□□□□□ -2.05
MSH4O15457 AC079248.2-201ENST00000623779 326 ntBASIC2.23□□□□□ -2.05
MSH4O15457 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.23□□□□□ -2.05
MSH4O15457 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
MSH4O15457 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
MSH4O15457 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
MSH4O15457 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
MSH4O15457 HSPE1P11-201ENST00000339579 310 ntBASIC2.22□□□□□ -2.05
MSH4O15457 SNORD56.2-201ENST00000363242 71 ntBASIC2.22□□□□□ -2.05
MSH4O15457 SNORA4.3-201ENST00000365564 137 ntBASIC2.22□□□□□ -2.05
MSH4O15457 RNU6-220P-201ENST00000390919 107 ntBASIC2.22□□□□□ -2.05
MSH4O15457 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms