Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 BPY2DP-201ENST00000422208 265 ntBASIC2.81□□□□□ -1.96
TO15178 AL365496.1-201ENST00000426885 215 ntBASIC2.81□□□□□ -1.96
TO15178 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.81□□□□□ -1.96
TO15178 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.81□□□□□ -1.96
TO15178 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.81□□□□□ -1.96
TO15178 RPS15AP27-201ENST00000449183 343 ntBASIC2.81□□□□□ -1.96
TO15178 RPL31P41-201ENST00000477967 372 ntBASIC2.81□□□□□ -1.96
TO15178 RPL23AP70-201ENST00000483361 460 ntBASIC2.81□□□□□ -1.96
TO15178 RN7SL20P-201ENST00000488827 297 ntBASIC2.81□□□□□ -1.96
TO15178 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.81□□□□□ -1.96
TO15178 LRRC34P2-201ENST00000514850 553 ntBASIC2.81□□□□□ -1.96
TO15178 AC008885.1-201ENST00000514930 301 ntBASIC2.81□□□□□ -1.96
TO15178 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.81□□□□□ -1.96
TO15178 RNU6-572P-201ENST00000516724 80 ntBASIC2.81□□□□□ -1.96
TO15178 SNORA31.19-201ENST00000517079 126 ntBASIC2.81□□□□□ -1.96
TO15178 RN7SKP40-201ENST00000517211 242 ntBASIC2.81□□□□□ -1.96
TO15178 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.81□□□□□ -1.96
TO15178 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.81□□□□□ -1.96
TO15178 AP003033.1-201ENST00000527244 415 ntBASIC2.81□□□□□ -1.96
TO15178 OR5AQ1P-201ENST00000527596 927 ntBASIC2.81□□□□□ -1.96
TO15178 AL157687.1-201ENST00000554853 619 ntBASIC2.81□□□□□ -1.96
TO15178 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.81□□□□□ -1.96
TO15178 MIR4782-201ENST00000577987 79 ntBASIC2.81□□□□□ -1.96
TO15178 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.81□□□□□ -1.96
TO15178 AC025165.5-201ENST00000602802 578 ntBASIC2.81□□□□□ -1.96
TO15178 AL355877.2-201ENST00000603670 358 ntBASIC2.81□□□□□ -1.96
TO15178 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.81□□□□□ -1.96
TO15178 AC004492.1-201ENST00000607036 742 ntBASIC2.81□□□□□ -1.96
TO15178 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.81□□□□□ -1.96
TO15178 AC093831.2-201ENST00000624393 3427 ntBASIC2.81□□□□□ -1.96
TO15178 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TO15178 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
TO15178 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
TO15178 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
TO15178 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
TO15178 ELF2P3-201ENST00000445099 1506 ntBASIC2.8□□□□□ -1.96
TO15178 MIR412-201ENST00000362142 91 ntBASIC2.8□□□□□ -1.96
TO15178 SNORA46-201ENST00000384762 135 ntBASIC2.8□□□□□ -1.96
TO15178 SNORA40C-201ENST00000391285 128 ntBASIC2.8□□□□□ -1.96
TO15178 RNA5SP274-201ENST00000410484 108 ntBASIC2.8□□□□□ -1.96
TO15178 Y_RNA.599-201ENST00000410489 109 ntBASIC2.8□□□□□ -1.96
TO15178 Y_RNA.619-201ENST00000410951 90 ntBASIC2.8□□□□□ -1.96
TO15178 RPL21P90-201ENST00000415692 466 ntBASIC2.8□□□□□ -1.96
TO15178 AL358075.3-201ENST00000426289 226 ntBASIC2.8□□□□□ -1.96
TO15178 AC007560.1-201ENST00000426912 237 ntBASIC2.8□□□□□ -1.96
TO15178 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.8□□□□□ -1.96
TO15178 AC098831.1-201ENST00000440661 216 ntBASIC2.8□□□□□ -1.96
TO15178 CACYBPP2-201ENST00000453625 678 ntBASIC2.8□□□□□ -1.96
TO15178 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.8□□□□□ -1.96
TO15178 AC022493.1-201ENST00000492984 337 ntBASIC2.8□□□□□ -1.96
TO15178 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.8□□□□□ -1.96
TO15178 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.8□□□□□ -1.96
TO15178 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.8□□□□□ -1.96
TO15178 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.8□□□□□ -1.96
TO15178 SUB1P1-201ENST00000524415 382 ntBASIC2.8□□□□□ -1.96
TO15178 AP002404.1-201ENST00000532005 451 ntBASIC2.8□□□□□ -1.96
TO15178 HIF1AP1-201ENST00000553642 175 ntBASIC2.8□□□□□ -1.96
TO15178 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.8□□□□□ -1.96
TO15178 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.8□□□□□ -1.96
TO15178 AL162413.1-201ENST00000603198 110 ntBASIC2.8□□□□□ -1.96
TO15178 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.8□□□□□ -1.96
TO15178 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.8□□□□□ -1.96
TO15178 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.79□□□□□ -1.96
TO15178 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.79□□□□□ -1.96
TO15178 SNORA71.1-201ENST00000364523 117 ntBASIC2.79□□□□□ -1.96
TO15178 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TO15178 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
TO15178 RNU6-483P-201ENST00000384088 108 ntBASIC2.79□□□□□ -1.96
TO15178 RNU6-1179P-201ENST00000384667 107 ntBASIC2.79□□□□□ -1.96
TO15178 Y_RNA.554-201ENST00000384672 102 ntBASIC2.79□□□□□ -1.96
TO15178 MIR578-201ENST00000384828 96 ntBASIC2.79□□□□□ -1.96
TO15178 RNU6-780P-201ENST00000391030 104 ntBASIC2.79□□□□□ -1.96
TO15178 AL356057.2-201ENST00000403318 432 ntBASIC2.79□□□□□ -1.96
TO15178 ZNF885P-201ENST00000420174 1098 ntBASIC2.79□□□□□ -1.96
TO15178 AC092427.1-202ENST00000430569 476 ntBASIC2.79□□□□□ -1.96
TO15178 MYL8P-204ENST00000431574 518 ntBASIC2.79□□□□□ -1.96
TO15178 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.79□□□□□ -1.96
TO15178 AL078601.1-201ENST00000444542 271 ntBASIC2.79□□□□□ -1.96
TO15178 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TO15178 HMGB1P30-201ENST00000492455 606 ntBASIC2.79□□□□□ -1.96
TO15178 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.79□□□□□ -1.96
TO15178 AC098799.2-201ENST00000509466 868 ntBASIC2.79□□□□□ -1.96
TO15178 AC008716.1-201ENST00000511084 513 ntBASIC2.79□□□□□ -1.96
TO15178 AC112206.3-201ENST00000514578 389 ntBASIC2.79□□□□□ -1.96
TO15178 RNU6-1281P-201ENST00000516223 105 ntBASIC2.79□□□□□ -1.96
TO15178 RNU6-1178P-201ENST00000516674 107 ntBASIC2.79□□□□□ -1.96
TO15178 RPPH1-2P-201ENST00000516688 293 ntBASIC2.79□□□□□ -1.96
TO15178 Y_RNA.704-201ENST00000516851 102 ntBASIC2.79□□□□□ -1.96
TO15178 RNU6-1183P-201ENST00000517054 60 ntBASIC2.79□□□□□ -1.96
TO15178 AC022634.1-201ENST00000520765 532 ntBASIC2.79□□□□□ -1.96
TO15178 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.79□□□□□ -1.96
TO15178 AL137161.1-201ENST00000532231 390 ntBASIC2.79□□□□□ -1.96
TO15178 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.79□□□□□ -1.96
TO15178 AC106782.4-201ENST00000568264 210 ntBASIC2.79□□□□□ -1.96
TO15178 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.79□□□□□ -1.96
TO15178 MTCO3P13-201ENST00000577757 781 ntBASIC2.79□□□□□ -1.96
TO15178 MIR4325-201ENST00000583049 90 ntBASIC2.79□□□□□ -1.96
TO15178 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.79□□□□□ -1.96
TO15178 BNIP3P30-201ENST00000601184 574 ntBASIC2.79□□□□□ -1.96
TO15178 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms