Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 MEMO1P3-201ENST00000459811 302 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 AC027575.1-201ENST00000481064 460 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 AC021146.2-201ENST00000504736 556 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 SNORA31.3-201ENST00000516029 96 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 ACA59.2-201ENST00000517061 156 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.15□□□□□ -2.23
SDCBPO00560 AC034114.1-201ENST00000520293 285 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.15□□□□□ -2.23
SDCBPO00560 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.15□□□□□ -2.23
SDCBPO00560 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.15□□□□□ -2.23
SDCBPO00560 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.15□□□□□ -2.23
SDCBPO00560 MTATP6P2-201ENST00000603319 678 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 AC006270.3-201ENST00000605967 1036 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.15□□□□□ -2.23
SDCBPO00560 AL512427.1-201ENST00000618593 349 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 AC013470.4-201ENST00000619978 986 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 AC112204.3-201ENST00000623822 332 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 AC097655.1-201ENST00000635075 318 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 AC091948.2-201ENST00000636510 279 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 LINC02211-204ENST00000642024 1070 ntBASIC1.15□□□□□ -2.23
SDCBPO00560 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.15□□□□□ -2.23
SDCBPO00560 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SDCBPO00560 RNU1-17P-201ENST00000363022 152 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 RNU6-14P-201ENST00000384630 106 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 MIR19A-201ENST00000384878 82 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 MIR561-201ENST00000385216 97 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 Y_RNA.578-201ENST00000390903 88 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 RNA5SP212-201ENST00000391223 107 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 MIR1283-2-201ENST00000408621 87 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.14□□□□□ -2.23
SDCBPO00560 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.14□□□□□ -2.23
SDCBPO00560 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.14□□□□□ -2.23
SDCBPO00560 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.14□□□□□ -2.23
SDCBPO00560 MTCO3P46-201ENST00000425787 232 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AC013262.1-201ENST00000426710 252 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 HMGB1P27-201ENST00000431429 603 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.14□□□□□ -2.23
SDCBPO00560 RPL7P34-201ENST00000433316 712 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.14□□□□□ -2.23
SDCBPO00560 AL353706.1-201ENST00000436728 494 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.14□□□□□ -2.23
SDCBPO00560 RPS29P23-201ENST00000458635 123 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AC104563.1-201ENST00000476147 376 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 RPL7P43-201ENST00000478876 753 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.14□□□□□ -2.23
SDCBPO00560 AC093752.1-206ENST00000511823 336 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AC024589.1-201ENST00000512207 263 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.14□□□□□ -2.23
SDCBPO00560 SNORA48.11-201ENST00000517015 89 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.14□□□□□ -2.23
SDCBPO00560 AC009902.1-201ENST00000519351 183 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.14□□□□□ -2.23
SDCBPO00560 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.14□□□□□ -2.23
SDCBPO00560 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.14□□□□□ -2.23
SDCBPO00560 DUXAP5-201ENST00000529668 529 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AC093012.1-202ENST00000549403 582 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.14□□□□□ -2.23
SDCBPO00560 MRPS36P5-201ENST00000551909 298 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.14□□□□□ -2.23
SDCBPO00560 AC022254.1-201ENST00000567857 235 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 MIR4293-201ENST00000584305 78 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AC008507.2-201ENST00000588402 1176 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 VN1R83P-201ENST00000595685 445 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AC018638.7-201ENST00000605836 1114 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AC090186.1-201ENST00000605991 572 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AC116312.1-201ENST00000606841 314 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AC034229.4-201ENST00000607861 441 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 MIR6134-201ENST00000617606 109 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AC006338.1-201ENST00000618453 749 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AC092192.1-201ENST00000633154 1018 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 AC099654.9-201ENST00000637055 678 ntBASIC1.14□□□□□ -2.23
SDCBPO00560 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
SDCBPO00560 MTND5P33-201ENST00000571250 1450 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SDCBPO00560 RNU6-853P-201ENST00000364306 107 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
SDCBPO00560 RNU6-203P-201ENST00000384038 104 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 MIR758-201ENST00000390227 88 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 USP9YP6-201ENST00000413550 854 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.13□□□□□ -2.23
SDCBPO00560 AL353621.1-201ENST00000418219 243 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 TOMM20P4-201ENST00000427861 435 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.13□□□□□ -2.23
SDCBPO00560 AC005094.1-201ENST00000440420 368 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 MTCO1P53-201ENST00000441633 699 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 ELOCP30-201ENST00000447108 299 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 AP000542.1-201ENST00000448473 371 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 FDX1P2-201ENST00000450769 375 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 ZNF886P-201ENST00000450781 723 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.13□□□□□ -2.23
SDCBPO00560 RPF2P2-201ENST00000504693 896 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 AC116655.1-201ENST00000508324 901 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.13□□□□□ -2.23
SDCBPO00560 AC008834.1-201ENST00000511612 175 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.13□□□□□ -2.23
SDCBPO00560 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.13□□□□□ -2.23
SDCBPO00560 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.13□□□□□ -2.23
SDCBPO00560 OR5B19P-201ENST00000531766 928 ntBASIC1.13□□□□□ -2.23
SDCBPO00560 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.13□□□□□ -2.23
SDCBPO00560 AL160236.1-201ENST00000556317 195 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms