Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
USP17L3A6NCW0 RNU6-105P-201ENST00000363909 104 ntBASIC5.09□□□□□ -1.59
USP17L3A6NCW0 Y_RNA.352-201ENST00000365439 102 ntBASIC5.09□□□□□ -1.59
USP17L3A6NCW0 Y_RNA.785-201ENST00000384290 109 ntBASIC5.09□□□□□ -1.59
USP17L3A6NCW0 MRPL35P1-201ENST00000404272 572 ntBASIC5.09□□□□□ -1.59
USP17L3A6NCW0 RNA5SP44-201ENST00000410446 133 ntBASIC5.09□□□□□ -1.59
USP17L3A6NCW0 RPL23AP46-201ENST00000438548 490 ntBASIC5.09□□□□□ -1.59
USP17L3A6NCW0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.09□□□□□ -1.59
USP17L3A6NCW0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.09□□□□□ -1.59
USP17L3A6NCW0 RPL31P13-201ENST00000484151 370 ntBASIC5.09□□□□□ -1.59
USP17L3A6NCW0 RPL23AP49-201ENST00000492925 468 ntBASIC5.09□□□□□ -1.59
USP17L3A6NCW0 GZMAP1-201ENST00000503054 631 ntBASIC5.09□□□□□ -1.59
USP17L3A6NCW0 AP004607.1-201ENST00000524456 203 ntBASIC5.09□□□□□ -1.59
USP17L3A6NCW0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.09□□□□□ -1.59
USP17L3A6NCW0 RRN3P3-201ENST00000549207 578 ntBASIC5.09□□□□□ -1.59
USP17L3A6NCW0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
USP17L3A6NCW0 HSPE1P5-201ENST00000561489 272 ntBASIC5.09□□□□□ -1.59
USP17L3A6NCW0 MIR4300-201ENST00000581016 96 ntBASIC5.09□□□□□ -1.59
USP17L3A6NCW0 MIR4472-2-201ENST00000582069 67 ntBASIC5.09□□□□□ -1.59
USP17L3A6NCW0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.09□□□□□ -1.59
USP17L3A6NCW0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
USP17L3A6NCW0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.09□□□□□ -1.59
USP17L3A6NCW0 AC126323.6-202ENST00000568092 3511 ntBASIC5.09□□□□□ -1.59
USP17L3A6NCW0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
USP17L3A6NCW0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
USP17L3A6NCW0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
USP17L3A6NCW0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.6
USP17L3A6NCW0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 U3.37-201ENST00000408528 213 ntBASIC5.08□□□□□ -1.6
USP17L3A6NCW0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 TMEM167AP1-201ENST00000423409 219 ntBASIC5.08□□□□□ -1.6
USP17L3A6NCW0 RPL21P66-201ENST00000426566 466 ntBASIC5.08□□□□□ -1.6
USP17L3A6NCW0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 RPS29P19-201ENST00000479709 171 ntBASIC5.08□□□□□ -1.6
USP17L3A6NCW0 RPS23P5-201ENST00000495419 428 ntBASIC5.08□□□□□ -1.6
USP17L3A6NCW0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.08□□□□□ -1.6
USP17L3A6NCW0 AC090617.3-201ENST00000573670 475 ntBASIC5.08□□□□□ -1.6
USP17L3A6NCW0 AC022655.2-201ENST00000577280 318 ntBASIC5.08□□□□□ -1.6
USP17L3A6NCW0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 AL592182.3-201ENST00000642132 3304 ntBASIC5.08□□□□□ -1.6
USP17L3A6NCW0 AC009541.1-201ENST00000438279 2662 ntBASIC5.08□□□□□ -1.6
USP17L3A6NCW0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
USP17L3A6NCW0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 snoU2_19.2-201ENST00000363024 80 ntBASIC5.07□□□□□ -1.6
USP17L3A6NCW0 RNU6-527P-201ENST00000363425 104 ntBASIC5.07□□□□□ -1.6
USP17L3A6NCW0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 RNU6-338P-201ENST00000383888 105 ntBASIC5.07□□□□□ -1.6
USP17L3A6NCW0 RNU6-140P-201ENST00000384566 108 ntBASIC5.07□□□□□ -1.6
USP17L3A6NCW0 MIR215-201ENST00000384858 110 ntBASIC5.07□□□□□ -1.6
USP17L3A6NCW0 SNORD78.2-201ENST00000391076 69 ntBASIC5.07□□□□□ -1.6
USP17L3A6NCW0 AL358453.1-201ENST00000422522 250 ntBASIC5.07□□□□□ -1.6
USP17L3A6NCW0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 AL445584.1-201ENST00000431451 330 ntBASIC5.07□□□□□ -1.6
USP17L3A6NCW0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 RPL12P18-201ENST00000437175 325 ntBASIC5.07□□□□□ -1.6
USP17L3A6NCW0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 snoU13.30-201ENST00000458951 104 ntBASIC5.07□□□□□ -1.6
USP17L3A6NCW0 RNU5B-3P-201ENST00000516601 115 ntBASIC5.07□□□□□ -1.6
USP17L3A6NCW0 DEFB108E-201ENST00000524692 240 ntBASIC5.07□□□□□ -1.6
USP17L3A6NCW0 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 MIR5685-201ENST00000579080 79 ntBASIC5.07□□□□□ -1.6
USP17L3A6NCW0 AC024220.1-201ENST00000603675 484 ntBASIC5.07□□□□□ -1.6
USP17L3A6NCW0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 MIR7151-201ENST00000617477 60 ntBASIC5.07□□□□□ -1.6
USP17L3A6NCW0 SCARNA4-201ENST00000629045 128 ntBASIC5.07□□□□□ -1.6
USP17L3A6NCW0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP17L3A6NCW0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.06□□□□□ -1.6
USP17L3A6NCW0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.06□□□□□ -1.6
USP17L3A6NCW0 NOL8P1-201ENST00000508336 3529 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 390.6 ms