Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 SNORA11-201ENST00000408789 128 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 RNU2-29P-201ENST00000410423 189 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC189A1A4V9 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC189A1A4V9 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC189A1A4V9 CALM1P1-201ENST00000442082 433 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC189A1A4V9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC189A1A4V9 AL162395.1-201ENST00000457882 422 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 snoU109.2-201ENST00000459316 135 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 AC112771.1-201ENST00000463581 102 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 AP004217.1-201ENST00000480579 346 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 Y_RNA.687-201ENST00000516558 91 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 AC023632.4-201ENST00000517783 191 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC189A1A4V9 AL133241.1-201ENST00000556832 487 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 AC136619.2-201ENST00000563361 631 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 AC006362.1-201ENST00000567392 174 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 MIR2682-201ENST00000580305 110 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 MIR3941-201ENST00000582572 103 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 RSL24D1P11-201ENST00000591045 491 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 AL161756.2-201ENST00000604597 246 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 AC021646.1-201ENST00000605469 484 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 AC245008.1-201ENST00000608123 476 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC189A1A4V9 MIR622-201ENST00000638396 96 ntBASIC3.14□□□□□ -1.91
CCDC189A1A4V9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC189A1A4V9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
CCDC189A1A4V9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC189A1A4V9 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC189A1A4V9 SNORA25.6-201ENST00000364121 118 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 RNU6-1103P-201ENST00000384150 107 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 PTMAP2-201ENST00000397627 327 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 UBA52P6-201ENST00000399822 382 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC189A1A4V9 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC189A1A4V9 AC245054.2-201ENST00000415639 319 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 AC138623.1-201ENST00000418060 216 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 AC073464.1-201ENST00000429823 534 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC189A1A4V9 FAM133DP-201ENST00000464802 691 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 RPS3AP17-201ENST00000472594 777 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 SLC25A15P5-201ENST00000508033 253 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 AC008526.1-201ENST00000509149 338 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 AC079140.3-201ENST00000511111 550 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC189A1A4V9 SMURF2P1-201ENST00000514992 481 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC189A1A4V9 RNU1-86P-201ENST00000516108 154 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 RNU1-107P-201ENST00000516617 154 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 RN7SKP272-201ENST00000516988 232 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC189A1A4V9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC189A1A4V9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC189A1A4V9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC189A1A4V9 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC189A1A4V9 AC008536.2-201ENST00000607284 349 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 uc_338.25-201ENST00000613756 156 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 U4atac.1-201ENST00000618345 95 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 CR381653.2-201ENST00000624041 768 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC189A1A4V9 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC189A1A4V9 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC189A1A4V9 RBBP8P1-201ENST00000449447 1844 ntBASIC3.13□□□□□ -1.91
CCDC189A1A4V9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
CCDC189A1A4V9 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC189A1A4V9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC189A1A4V9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC189A1A4V9 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC189A1A4V9 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC189A1A4V9 SNORD116-1-201ENST00000384335 95 ntBASIC3.12□□□□□ -1.91
CCDC189A1A4V9 MIR23B-201ENST00000384832 97 ntBASIC3.12□□□□□ -1.91
CCDC189A1A4V9 MIR490-201ENST00000384865 128 ntBASIC3.12□□□□□ -1.91
CCDC189A1A4V9 Y_RNA.582-201ENST00000391023 95 ntBASIC3.12□□□□□ -1.91
CCDC189A1A4V9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC189A1A4V9 RNU4-47P-201ENST00000410876 114 ntBASIC3.12□□□□□ -1.91
CCDC189A1A4V9 OR9R1P-201ENST00000412200 877 ntBASIC3.12□□□□□ -1.91
CCDC189A1A4V9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC189A1A4V9 AC000111.3-201ENST00000433478 193 ntBASIC3.12□□□□□ -1.91
CCDC189A1A4V9 AC006512.1-201ENST00000468816 291 ntBASIC3.12□□□□□ -1.91
CCDC189A1A4V9 HMGB1P29-201ENST00000505659 499 ntBASIC3.12□□□□□ -1.91
CCDC189A1A4V9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC189A1A4V9 AC105137.2-201ENST00000569073 466 ntBASIC3.12□□□□□ -1.91
CCDC189A1A4V9 AC073539.2-201ENST00000597113 165 ntBASIC3.12□□□□□ -1.91
CCDC189A1A4V9 AC078795.2-201ENST00000602835 1252 ntBASIC3.12□□□□□ -1.91
CCDC189A1A4V9 AC008739.3-201ENST00000603262 127 ntBASIC3.12□□□□□ -1.91
CCDC189A1A4V9 AC098614.4-201ENST00000607601 462 ntBASIC3.12□□□□□ -1.91
CCDC189A1A4V9 AC100793.4-201ENST00000613683 429 ntBASIC3.12□□□□□ -1.91
CCDC189A1A4V9 AC009509.4-201ENST00000619202 509 ntBASIC3.12□□□□□ -1.91
CCDC189A1A4V9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC189A1A4V9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
CCDC189A1A4V9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC189A1A4V9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC189A1A4V9 ZNF680P1-201ENST00000436625 1469 ntBASIC3.11□□□□□ -1.91
CCDC189A1A4V9 RNU6-715P-201ENST00000365204 103 ntBASIC3.11□□□□□ -1.91
CCDC189A1A4V9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC189A1A4V9 GSTA9P-201ENST00000406231 611 ntBASIC3.11□□□□□ -1.91
CCDC189A1A4V9 SNORD88.1-201ENST00000408684 91 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms