Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 AC011611.1-201ENST00000552179 197 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 MIR3609-201ENST00000582661 80 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 AL117336.2-201ENST00000602435 335 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 ATP1B3P1-201ENST00000605365 821 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 Y_RNA.804-201ENST00000615262 101 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 AL138880.2-201ENST00000616214 239 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 AC009233.1-201ENST00000616477 371 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 U6.105-201ENST00000637379 88 ntBASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.15□□□□□ -1.91
TCRBV7S3A2A0A539 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AC073325.2-201ENST00000339545 159 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 RNU6-778P-201ENST00000363269 103 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 RNU6-1303P-201ENST00000364841 107 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 RNU6-1013P-201ENST00000384180 107 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 MIR183-201ENST00000384958 110 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 MT-TD-201ENST00000387419 68 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AL356432.1-201ENST00000405809 419 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 RAP1BP3-201ENST00000407180 549 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AL592148.1-201ENST00000413568 445 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AL353678.1-201ENST00000422735 741 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AC098614.2-201ENST00000426040 255 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AL365400.1-201ENST00000431854 640 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 MTATP6P7-201ENST00000453315 681 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AC087884.1-201ENST00000469738 328 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AC026801.1-201ENST00000497178 464 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 PHBP14-201ENST00000512887 367 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 MIR892C-201ENST00000516410 77 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 SNORA67.7-201ENST00000516664 135 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AP000763.2-201ENST00000540641 163 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 RAB11AP2-201ENST00000545905 639 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 SCOCP1-201ENST00000554676 349 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 MIR3158-1-201ENST00000583596 81 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 UBL5P2-201ENST00000583788 219 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 MIR5692C1-201ENST00000585309 91 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 C8orf59P2-201ENST00000603441 271 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AL645944.1-201ENST00000603857 493 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 uc_338.5-201ENST00000611839 155 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AC005858.4-201ENST00000623191 700 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 AC005183.1-201ENST00000603687 1979 ntBASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
TCRBV7S3A2A0A539 MTND5P27-201ENST00000428871 1720 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 RNA5SP295-201ENST00000362655 121 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 SNORD3E-201ENST00000362899 217 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 RNU6-797P-201ENST00000363101 109 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 RNU6-266P-201ENST00000364225 107 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 RNU6-384P-201ENST00000364900 104 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 RNU6-166P-201ENST00000384371 107 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 Y_RNA.623-201ENST00000411128 95 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 NDUFB4P5-201ENST00000415445 361 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 NCOR1P3-201ENST00000420479 303 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 AL627311.1-201ENST00000431514 115 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 AC093019.1-201ENST00000443135 252 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 SSXP4-201ENST00000451349 245 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 AMD1P1-201ENST00000457220 922 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 AC117503.1-201ENST00000472241 394 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 Y_RNA.691-201ENST00000516611 103 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 SNORA31.19-201ENST00000517079 126 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 AP000889.2-201ENST00000532684 490 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 AC026464.5-201ENST00000562497 722 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 AC005498.1-201ENST00000592125 465 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 AL355598.1-201ENST00000604169 202 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 AC012468.1-201ENST00000604888 430 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 AC002044.1-201ENST00000606707 158 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 AL121757.2-201ENST00000611223 313 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 FAM157A-202ENST00000615155 405 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 AC007318.2-201ENST00000620999 243 ntBASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TCRBV7S3A2A0A539 MTCO1P12-201ENST00000414273 1543 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms