Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 RNU6-433P-201ENST00000363216 104 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 RNU6-190P-201ENST00000384154 102 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 SNORA8-201ENST00000384574 139 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 RNU2-36P-201ENST00000410361 191 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AC009963.1-201ENST00000417265 157 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AC008267.5-201ENST00000424928 265 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AC104058.1-201ENST00000448028 297 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 MTAPP1-201ENST00000489154 819 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AC112673.1-201ENST00000513168 575 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 RNU2-10P-201ENST00000516375 211 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AP000763.2-201ENST00000540641 163 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AC093249.1-201ENST00000567049 203 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AC098614.4-201ENST00000607601 462 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AC046143.2-201ENST00000609789 160 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AC130324.3-201ENST00000614165 542 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 uc_338.15-201ENST00000615470 191 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AP000484.1-201ENST00000620067 1252 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 MIR6132-201ENST00000622083 109 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 RBBP8P1-201ENST00000449447 1844 ntBASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
TRAV25A0A0B4J276 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 MIR21-201ENST00000362134 72 ntBASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 RNU6-487P-201ENST00000365430 104 ntBASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 MIR186-201ENST00000384988 86 ntBASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 RNA5SP465-201ENST00000391195 109 ntBASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 AL030996.1-201ENST00000411430 235 ntBASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 POLHP1-201ENST00000411806 470 ntBASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 EXOSC3P1-201ENST00000448649 500 ntBASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 AC134050.1-201ENST00000495088 933 ntBASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 ARL2BPP2-201ENST00000550907 489 ntBASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 BNIP3P25-201ENST00000596023 559 ntBASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 BNIP3P30-201ENST00000601184 574 ntBASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 AL078605.1-201ENST00000603529 500 ntBASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 AL670379.2-201ENST00000604983 252 ntBASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 AL670379.4-201ENST00000605279 254 ntBASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 AL158050.2-201ENST00000605336 568 ntBASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 MIR6766-201ENST00000622641 72 ntBASIC1.73□□□□□ -2.13
TRAV25A0A0B4J276 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AC092881.1-201ENST00000638218 2733 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 RNU6-529P-201ENST00000363383 104 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 RNU5E-6P-201ENST00000365574 115 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 RNU6-843P-201ENST00000384454 104 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 SNORA48.3-201ENST00000391081 134 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AL591416.1-201ENST00000404015 867 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 RNU6-757P-201ENST00000410334 100 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 RN7SKP192-201ENST00000411291 327 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AL022400.1-201ENST00000423946 935 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 USP9YP17-201ENST00000444617 696 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 RNA5SP281-201ENST00000516504 135 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AC105185.1-201ENST00000518705 535 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 MTCYBP20-201ENST00000524239 1129 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AP004607.1-201ENST00000524456 203 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AC011979.2-201ENST00000527568 352 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AC087241.2-201ENST00000535801 324 ntBASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV25A0A0B4J276 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms