Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 MTND1P28-201ENST00000435623 950 ntBASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 RPL39P29-201ENST00000447779 157 ntBASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 MTND3P4-201ENST00000453537 303 ntBASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 AL441985.1-201ENST00000457727 251 ntBASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 AC112771.1-201ENST00000463581 102 ntBASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 AL133373.1-201ENST00000497098 94 ntBASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 AC012414.6-201ENST00000568241 401 ntBASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 AC002400.1-201ENST00000569310 726 ntBASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 ADAM3B-201ENST00000569937 840 ntBASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 AL596245.1-201ENST00000618994 362 ntBASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 AP003485.1-201ENST00000625093 753 ntBASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 TEX21P-201ENST00000447107 1476 ntBASIC0.67□□□□□ -2.3
TRAV12-3A0A0B4J271 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 RNU1-58P-201ENST00000362413 163 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 SNORD14D-201ENST00000384390 87 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 RPS27P16-201ENST00000425758 201 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 Z82205.1-201ENST00000428456 297 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 AL135790.2-201ENST00000437701 267 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 VN1R10P-201ENST00000447106 875 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 RPS27P1-201ENST00000450552 247 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 CECR9-201ENST00000453421 199 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 MEMO1P3-201ENST00000459811 302 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 AC011005.2-201ENST00000487324 359 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 RPS23P4-201ENST00000487908 423 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 MTCYBP16-201ENST00000509187 1129 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 RNU6-703P-201ENST00000516946 107 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 AC079148.1-201ENST00000565944 819 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 AC098848.2-201ENST00000588023 330 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 AC011451.2-201ENST00000604303 598 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 AC097468.3-201ENST00000607956 456 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 AL589994.2-201ENST00000621124 579 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 AC138627.2-201ENST00000624202 601 ntBASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV12-3A0A0B4J271 AL138713.1-201ENST00000624026 2130 ntBASIC0.65□□□□□ -2.3
TRAV12-3A0A0B4J271 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 OR5T3-201ENST00000303059 1023 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 Y_RNA.245-201ENST00000364493 95 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-1032P-201ENST00000384100 107 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AC092634.2-201ENST00000428146 1010 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AC244505.5-201ENST00000443639 207 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AC013828.1-201ENST00000481845 158 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 RPS3AP22-201ENST00000488297 769 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 RAB11AP2-201ENST00000545905 639 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AC090115.3-201ENST00000553218 849 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 SNORA77B-201ENST00000578179 125 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 BBIP1P1-201ENST00000602999 279 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AL355598.1-201ENST00000604169 202 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AL022345.1-201ENST00000607292 135 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AL355802.3-201ENST00000607571 545 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AP001033.2-201ENST00000609701 1003 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AC002550.2-201ENST00000621246 394 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AL359757.2-201ENST00000624309 274 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 AL590396.4-201ENST00000636779 956 ntBASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.31
TRAV12-3A0A0B4J271 ICE2P2-201ENST00000483823 2787 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 MIR302D-201ENST00000362275 68 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 RNA5SP327-201ENST00000362494 101 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU1-22P-201ENST00000363334 158 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 SNORD114-27-201ENST00000363766 70 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 SNORD115-48-201ENST00000364764 76 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-611P-201ENST00000384276 104 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU2-68P-201ENST00000410878 191 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 PRELID3BP1-201ENST00000457142 540 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 RPL21P47-201ENST00000483696 477 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms