Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC006504.8-201ENST00000621046 635 ntBASIC3.16□□□□□ -1.9
SNX9Q9Y5X1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX9Q9Y5X1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SNX9Q9Y5X1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX9Q9Y5X1 AC103710.2-202ENST00000641454 2853 ntBASIC3.16□□□□□ -1.9
SNX9Q9Y5X1 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SNX9Q9Y5X1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SNX9Q9Y5X1 GABRG2-229ENST00000641017 3628 ntBASIC3.15□□□□□ -1.9
SNX9Q9Y5X1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SNX9Q9Y5X1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 RNU4-20P-201ENST00000365601 151 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 NEFMP1-201ENST00000443423 1006 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 UQCRHP3-201ENST00000451503 251 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 RNU7-180P-201ENST00000459240 63 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 RPS20P20-201ENST00000460498 340 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 EIF4EP3-201ENST00000498782 656 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 MTCO2P30-201ENST00000503662 364 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 MTCO3P9-201ENST00000506989 781 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 AC117522.3-201ENST00000507974 584 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 GMPSP1-201ENST00000514075 579 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 AL355836.1-201ENST00000555951 870 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 MIR3921-201ENST00000577308 85 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 AC010525.2-201ENST00000590920 195 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 AC174048.1-201ENST00000603389 144 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 AL627309.6-201ENST00000606857 840 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 AL008636.1-201ENST00000625038 1018 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 AL137790.1-201ENST00000634283 177 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 ASNSP3-201ENST00000451989 1306 ntBASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
SNX9Q9Y5X1 AC009487.2-201ENST00000420969 6821 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 AC093831.2-201ENST00000624393 3427 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 AL365361.1-201ENST00000566942 3481 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 RNU5A-1-201ENST00000362698 116 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 RNU5E-4P-201ENST00000364931 120 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 RNU6-38P-201ENST00000384085 107 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 MIR1290-201ENST00000408735 78 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 RNU2-29P-201ENST00000410423 189 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 AC092809.3-201ENST00000415453 231 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 NDUFB4P7-201ENST00000423198 363 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 AL139132.1-201ENST00000431587 344 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 MTND3P16-201ENST00000452205 344 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 AL590639.1-201ENST00000456484 337 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 RNU6-333P-201ENST00000459117 107 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 RN7SL499P-201ENST00000481141 276 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 RPL38P4-201ENST00000502376 214 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 AC083906.5-201ENST00000503722 328 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 AC018710.1-201ENST00000506509 158 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 RNU6-927P-201ENST00000516199 100 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 RNU6-840P-201ENST00000517275 65 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 NRBF2P5-201ENST00000603087 788 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 AC104763.2-201ENST00000604179 382 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 MTND5P42-201ENST00000637720 498 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 AC008568.2-201ENST00000623862 2313 ntBASIC3.14□□□□□ -1.91
SNX9Q9Y5X1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 OR4G2P-202ENST00000641004 1759 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 Y_RNA.279-201ENST00000364763 95 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 SNORA9.2-201ENST00000365361 133 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 MIR514A2-201ENST00000385131 88 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 MIR514A3-201ENST00000385132 88 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 RNA5SP252-201ENST00000391131 119 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 RNU6-876P-201ENST00000391295 104 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AL356776.1-201ENST00000406574 447 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 RNA5SP118-201ENST00000410385 109 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 RNU6-193P-201ENST00000410977 107 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AL513331.1-201ENST00000411908 397 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 BMS1P22-201ENST00000414726 313 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 COTL1P1-201ENST00000422309 375 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AL031183.1-201ENST00000457667 207 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 RN7SL75P-201ENST00000461926 281 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AL049874.1-201ENST00000489560 388 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AC104806.1-201ENST00000508720 308 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AL359273.1-201ENST00000510918 627 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 RNA5SP503-201ENST00000517047 117 ntBASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX9Q9Y5X1 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms