Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 7SK.7-201ENST00000603504 247 ntBASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 AC079587.1-201ENST00000603846 277 ntBASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 AC127024.6-201ENST00000621598 424 ntBASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
GTF3C3Q9Y5Q9 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 MTCO1P12-201ENST00000414273 1543 ntBASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 AC009541.1-201ENST00000438279 2662 ntBASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 Y_RNA.128-201ENST00000363391 112 ntBASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 Y_RNA.197-201ENST00000364004 102 ntBASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 RNU6-1227P-201ENST00000383981 107 ntBASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 Y_RNA.473-201ENST00000384333 102 ntBASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 RNU6-1222P-201ENST00000384615 107 ntBASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 MIR544A-201ENST00000384855 91 ntBASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 EIF1AXP1-201ENST00000419267 435 ntBASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 RPL31P12-201ENST00000422587 358 ntBASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 AL136097.1-201ENST00000456945 913 ntBASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 RPS29P19-201ENST00000479709 171 ntBASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 MIR4738-201ENST00000579134 87 ntBASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 AC024940.4-201ENST00000605507 246 ntBASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 AC134503.1-201ENST00000633048 54 ntBASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 AC110079.1-202ENST00000635213 138 ntBASIC5.4□□□□□ -1.54
GTF3C3Q9Y5Q9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
GTF3C3Q9Y5Q9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
GTF3C3Q9Y5Q9 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 RNU1-32P-201ENST00000363937 159 ntBASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 RNU6-142P-201ENST00000384019 107 ntBASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 RNU6-784P-201ENST00000384330 106 ntBASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 RNA5SP44-201ENST00000410446 133 ntBASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 RPL23AP52-201ENST00000439311 478 ntBASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 RN7SL303P-201ENST00000469773 251 ntBASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 RPS26P21-201ENST00000475397 348 ntBASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 IGKV1-32-201ENST00000519290 311 ntBASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 AC007991.1-201ENST00000522680 631 ntBASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 AC090510.2-201ENST00000617465 629 ntBASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 AC092608.2-201ENST00000624427 218 ntBASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 MTND5P9-201ENST00000503854 1755 ntBASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 Z82217.1-201ENST00000625157 8149 ntBASIC5.39□□□□□ -1.55
GTF3C3Q9Y5Q9 AC002543.1-201ENST00000299783 1954 ntBASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 RNU6-1040P-201ENST00000383974 107 ntBASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 RNU6-692P-201ENST00000384496 107 ntBASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 RNU6-331P-201ENST00000384724 107 ntBASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 AC011816.1-201ENST00000441346 546 ntBASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 AP001025.1-201ENST00000486139 332 ntBASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 AC068781.1-201ENST00000488231 618 ntBASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 RPS23P1-201ENST00000491662 432 ntBASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 SNRPCP2-201ENST00000504370 475 ntBASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 RNU7-143P-201ENST00000516781 65 ntBASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 AC092490.3-201ENST00000545370 572 ntBASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 MIR3614-201ENST00000581261 86 ntBASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 AC090897.2-201ENST00000581715 130 ntBASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 FAM27D1-201ENST00000612308 341 ntBASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 MIR6837-201ENST00000620884 64 ntBASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 UCA1.1-201ENST00000620952 75 ntBASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
GTF3C3Q9Y5Q9 SNORD42.2-201ENST00000365570 69 ntBASIC5.37□□□□□ -1.55
GTF3C3Q9Y5Q9 RNU6-890P-201ENST00000384121 107 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms