Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 snoU13.22-201ENST00000459428 104 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AC069439.1-201ENST00000494739 167 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AC026784.1-201ENST00000507986 352 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 Y_RNA.665-201ENST00000516177 98 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AP000763.2-201ENST00000540641 163 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AC007458.1-201ENST00000542812 373 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AL035413.2-201ENST00000604801 525 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 BNIP3P10-201ENST00000605360 577 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 ATP5A1P2-202ENST00000616464 443 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 AC068647.1-201ENST00000489539 2265 ntBASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
COL4A3BPQ9Y5P4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 AL049781.1-201ENST00000623195 3585 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 U3.12-201ENST00000364498 214 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 RNU1-100P-201ENST00000365255 165 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 Y_RNA.373-201ENST00000365600 103 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 MIR490-201ENST00000384865 128 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 AL365400.1-201ENST00000431854 640 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 AL441985.1-201ENST00000457727 251 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 FCF1P3-201ENST00000496394 590 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 AC116655.1-201ENST00000508324 901 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 AC098799.2-201ENST00000509466 868 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 Y_RNA.687-201ENST00000516558 91 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 RPL7P20-201ENST00000520308 745 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 AC008121.1-201ENST00000603244 268 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 MIR7975-201ENST00000619350 68 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 AC100810.6-201ENST00000638068 285 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 AC007496.3-201ENST00000624987 3443 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 MFSD8-233ENST00000641482 4860 ntBASIC3.91□□□□□ -1.78
COL4A3BPQ9Y5P4 AP003122.5-201ENST00000527668 3766 ntBASIC3.9□□□□□ -1.78
COL4A3BPQ9Y5P4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL4A3BPQ9Y5P4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 RNA5SP50-201ENST00000363731 107 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 FGF7P8-201ENST00000402994 292 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 AL138878.1-201ENST00000405131 347 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 USP9YP20-201ENST00000419224 558 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 AP000907.1-201ENST00000428428 510 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 snoU109.2-201ENST00000459316 135 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 TRBVA-201ENST00000498804 316 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 TBCAP3-201ENST00000512475 312 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 AC114781.4-201ENST00000513707 639 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 RNU6-581P-201ENST00000516214 105 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 AC026333.2-201ENST00000542164 106 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 BNIP3P25-201ENST00000596023 559 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 SRGNP1-201ENST00000603392 451 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 AP000787.2-201ENST00000604432 568 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 UCA1.1-201ENST00000620952 75 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 AC022149.2-201ENST00000621061 203 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 Z69720.2-201ENST00000624755 279 ntBASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.9□□□□□ -1.79
COL4A3BPQ9Y5P4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 RNA5SP72-201ENST00000364442 117 ntBASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 RNU6-19P-201ENST00000384718 107 ntBASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 MIR34B-201ENST00000385076 84 ntBASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 RPS15AP6-201ENST00000420703 385 ntBASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 PTGES3P4-201ENST00000426243 356 ntBASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 HMGB1P31-201ENST00000437242 427 ntBASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 RNU7-138P-201ENST00000459479 64 ntBASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 RPL23AP14-201ENST00000468281 468 ntBASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 AC025518.1-201ENST00000479856 347 ntBASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 AC083904.1-201ENST00000487828 231 ntBASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 AC010265.1-201ENST00000513509 211 ntBASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 AC087854.1-201ENST00000519706 414 ntBASIC3.89□□□□□ -1.79
COL4A3BPQ9Y5P4 AC023050.3-201ENST00000541142 333 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms