Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RNU6-7-201ENST00000364784 107 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU5E-7P-201ENST00000365290 117 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-8-201ENST00000365467 107 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-25P-201ENST00000383873 107 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-1-201ENST00000383898 107 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-48P-201ENST00000384161 107 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-36P-201ENST00000384172 107 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-4P-201ENST00000384205 107 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-5P-201ENST00000384238 107 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 Y_RNA.460-201ENST00000384255 102 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-198P-201ENST00000384258 104 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-3P-201ENST00000384314 107 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-16P-201ENST00000384385 107 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-15P-201ENST00000384534 107 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-2-201ENST00000384627 107 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-29P-201ENST00000384637 107 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-9-201ENST00000384776 107 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-33P-201ENST00000384793 107 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RHEBP3-201ENST00000411920 351 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 SNORD56-201ENST00000413522 71 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 BPY2DP-201ENST00000422208 265 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 AL714022.1-201ENST00000439897 151 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 NIPA2P5-201ENST00000452282 464 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 AC069499.1-201ENST00000489433 509 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 AC092436.3-201ENST00000511788 257 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU7-143P-201ENST00000516781 65 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 AP005597.4-201ENST00000526762 229 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 YPEL5P3-201ENST00000547227 352 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-6P-201ENST00000606623 107 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 AL161629.2-201ENST00000615347 275 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 AL355365.1-201ENST00000616480 294 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 AC012314.7-201ENST00000619693 93 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 MIR3199-2-201ENST00000636243 86 ntBASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PCDHGA9Q9Y5G4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU4-79P-201ENST00000362764 141 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 SNORD35B-201ENST00000363660 87 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 SNORA5A-201ENST00000384111 134 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 RNU6-1297P-201ENST00000384415 104 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 Y_RNA.535-201ENST00000384612 99 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 AL445529.1-201ENST00000398713 389 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 AC093578.1-201ENST00000415219 368 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 MTCO2P27-201ENST00000420740 428 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 SAR1AP4-201ENST00000429225 591 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 AL159987.2-201ENST00000432754 307 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 RPS3AP52-201ENST00000435639 297 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 HMGN2P10-201ENST00000448085 265 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 AL136097.1-201ENST00000456945 913 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 RNA5SP179-201ENST00000517284 121 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 AC010186.2-204ENST00000537668 439 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 AC087499.8-201ENST00000578406 226 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 POLR3GP2-201ENST00000588366 668 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 AL034408.1-202ENST00000636088 415 ntBASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGA9Q9Y5G4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.65□□□□□ -1.82
PCDHGA9Q9Y5G4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
PCDHGA9Q9Y5G4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 SNORD62.1-201ENST00000362541 86 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 RNU6-525P-201ENST00000363685 104 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 RNU4-76P-201ENST00000364509 141 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 U8.11-201ENST00000384699 133 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 U8.12-201ENST00000384701 133 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 AC245291.1-201ENST00000419501 328 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 AC091286.1-201ENST00000431233 461 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 AC125238.1-201ENST00000448842 249 ntBASIC3.65□□□□□ -1.83
PCDHGA9Q9Y5G4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms