Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 MIR153-1-201ENST00000384914 90 ntBASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 SNORD96B-201ENST00000386148 79 ntBASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 Y_RNA.592-201ENST00000410274 109 ntBASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 AL035423.1-201ENST00000420331 213 ntBASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 AC004383.1-201ENST00000438135 289 ntBASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 RPEP5-201ENST00000441137 268 ntBASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 AC074250.1-201ENST00000511117 192 ntBASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 AC068446.3-201ENST00000555285 382 ntBASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 AL157871.3-201ENST00000557231 293 ntBASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 U3.45-201ENST00000607547 219 ntBASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RTCBQ9Y3I0 AC009812.4-201ENST00000569134 1805 ntBASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 Y_RNA.105-201ENST00000363182 111 ntBASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 RNA5SP399-201ENST00000364003 117 ntBASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 RNU6-395P-201ENST00000365662 106 ntBASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 MIR521-1-201ENST00000384902 87 ntBASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 RNU2-25P-201ENST00000411041 191 ntBASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 EI24P1-201ENST00000416584 867 ntBASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 AL591419.1-201ENST00000427423 339 ntBASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 AL159987.2-201ENST00000432754 307 ntBASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 RN7SL293P-201ENST00000481765 281 ntBASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 AC022080.3-201ENST00000544433 482 ntBASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 AL121603.1-201ENST00000553815 142 ntBASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 AC009779.6-201ENST00000603972 165 ntBASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 AP000787.2-201ENST00000604432 568 ntBASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 MTND5P9-201ENST00000503854 1755 ntBASIC5.04□□□□□ -1.6
RTCBQ9Y3I0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 Y_RNA.33-201ENST00000362591 102 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 SNORD27-201ENST00000363981 72 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 RNU6-512P-201ENST00000364438 103 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 RNU6-338P-201ENST00000383888 105 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 U1.1-201ENST00000384101 164 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 RNU6-121P-201ENST00000410525 99 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 RPL21P38-201ENST00000418090 167 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 AP000907.1-201ENST00000428428 510 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 AL353748.1-201ENST00000440753 474 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 U8.21-201ENST00000459536 136 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 AL133162.1-201ENST00000463228 453 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 SCARNA14-201ENST00000516903 136 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 RNA5SP471-201ENST00000516971 106 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 SNORA81.3-201ENST00000517283 198 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 U2.22-201ENST00000636441 106 ntBASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RTCBQ9Y3I0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 AL049555.1-201ENST00000562834 1933 ntBASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 RNU6-1203P-201ENST00000410703 110 ntBASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 RNU6-130P-201ENST00000411112 103 ntBASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 RNU2-71P-201ENST00000411395 189 ntBASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 AC096920.1-201ENST00000423991 241 ntBASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 NDUFB1P2-201ENST00000449477 176 ntBASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 HSPE1P6-201ENST00000479457 291 ntBASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 AC106707.2-201ENST00000484182 374 ntBASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.02□□□□□ -1.61
RTCBQ9Y3I0 AC104619.4-201ENST00000510773 249 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms