Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC0.42□□□□□ -2.34
UBE2D4Q9Y2X8 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.42□□□□□ -2.34
UBE2D4Q9Y2X8 RNU6-27P-201ENST00000516146 107 ntBASIC0.42□□□□□ -2.34
UBE2D4Q9Y2X8 RNU6-1223P-201ENST00000517124 104 ntBASIC0.42□□□□□ -2.34
UBE2D4Q9Y2X8 SNORA31.22-201ENST00000517204 135 ntBASIC0.42□□□□□ -2.34
UBE2D4Q9Y2X8 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.42□□□□□ -2.34
UBE2D4Q9Y2X8 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.42□□□□□ -2.34
UBE2D4Q9Y2X8 CYP3A137P-201ENST00000562436 69 ntBASIC0.42□□□□□ -2.34
UBE2D4Q9Y2X8 AC233266.2-201ENST00000567067 528 ntBASIC0.42□□□□□ -2.34
UBE2D4Q9Y2X8 AC005786.1-201ENST00000588553 154 ntBASIC0.42□□□□□ -2.34
UBE2D4Q9Y2X8 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.42□□□□□ -2.34
UBE2D4Q9Y2X8 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.42□□□□□ -2.34
UBE2D4Q9Y2X8 AL391646.1-201ENST00000603860 190 ntBASIC0.42□□□□□ -2.34
UBE2D4Q9Y2X8 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.42□□□□□ -2.34
UBE2D4Q9Y2X8 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.42□□□□□ -2.34
UBE2D4Q9Y2X8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 MIR518E-201ENST00000385252 88 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 MIR548J-201ENST00000408833 112 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 USP9YP33-201ENST00000412220 421 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 CBX3P6-201ENST00000430257 527 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 RPL7P34-201ENST00000433316 712 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 MTCO1P44-201ENST00000441935 243 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 C1DP3-201ENST00000455013 423 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 OR9N1P-202ENST00000494289 481 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 SNORD116-28-201ENST00000516123 91 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 SNORA48.9-201ENST00000516419 162 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 AC136628.3-201ENST00000521868 290 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 HSPA8P13-201ENST00000523715 472 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 CYB5AP5-201ENST00000549779 389 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 AC124947.2-202ENST00000552735 133 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 AC073544.2-201ENST00000601155 540 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 HMGB1P51-201ENST00000605166 638 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 AC021851.1-201ENST00000608537 1082 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 MIR5087-201ENST00000635826 76 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 MTND4P16-201ENST00000466108 1367 ntBASIC0.41□□□□□ -2.34
UBE2D4Q9Y2X8 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.4□□□□□ -2.34
UBE2D4Q9Y2X8 SNORD1A-201ENST00000364968 72 ntBASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 RNU6-167P-201ENST00000384292 106 ntBASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 MIR506-201ENST00000384998 124 ntBASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 MIR95-201ENST00000385072 81 ntBASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 AL139098.1-201ENST00000407291 389 ntBASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 Z82210.1-201ENST00000440037 231 ntBASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 RPL26P6-201ENST00000440913 438 ntBASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 AC006512.1-201ENST00000468816 291 ntBASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 AC113398.2-201ENST00000507630 558 ntBASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 OR5AK1P-201ENST00000524837 922 ntBASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 AP003484.1-201ENST00000530974 250 ntBASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 CYP4A27P-201ENST00000567218 190 ntBASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 AC016727.2-201ENST00000603988 621 ntBASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 uc_338.17-201ENST00000619633 179 ntBASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 AC083865.1-201ENST00000636634 831 ntBASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 MIR6767-201ENST00000637302 66 ntBASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
UBE2D4Q9Y2X8 RNU5A-1-201ENST00000362698 116 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 Y_RNA.116-201ENST00000363292 103 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 RNU6-884P-201ENST00000363889 107 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 SNORD82-201ENST00000365530 70 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 RNU6-444P-201ENST00000383988 108 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 MIR888-201ENST00000401186 77 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 AL117342.1-201ENST00000404861 406 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 BPY2DP-201ENST00000422208 265 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 AL591043.1-201ENST00000432461 424 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 AL353691.1-201ENST00000451332 387 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 KATNBL1P6-201ENST00000453433 915 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 SMURF2P1-201ENST00000514992 481 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 RNU6-1256P-201ENST00000516539 103 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 RNA5SP384-201ENST00000516615 116 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 AC004812.1-201ENST00000540773 146 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 AL137100.2-201ENST00000555786 315 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 MIR5000-201ENST00000577717 103 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 AC007490.1-201ENST00000624321 703 ntBASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
UBE2D4Q9Y2X8 RNU5E-1-201ENST00000362477 120 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 Y_RNA.118-201ENST00000363300 101 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 SNORA4.1-201ENST00000364263 144 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 RNA5SP100-201ENST00000410903 110 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 RNA5SP59-201ENST00000410922 110 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 MOB1AP2-201ENST00000446060 614 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 DUXAP8-207ENST00000456786 622 ntBASIC0.38□□□□□ -2.35
UBE2D4Q9Y2X8 RPL31P3-201ENST00000458430 332 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms