Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.45□□□□□ -1.54
ZC3H4Q9UPT8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 AC126323.6-202ENST00000568092 3511 ntBASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 RNU6-222P-201ENST00000362438 107 ntBASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 AC007919.1-201ENST00000429380 217 ntBASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 SNRPGP5-201ENST00000456003 220 ntBASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 RPS29P27-201ENST00000463711 170 ntBASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 RNA5SP497-201ENST00000516081 97 ntBASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 RNA5SP290-201ENST00000517133 127 ntBASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 AC005476.1-201ENST00000554427 397 ntBASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 Z83818.1-201ENST00000603584 150 ntBASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 AC037487.3-201ENST00000606668 112 ntBASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 CR392039.5-201ENST00000623201 510 ntBASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 AC021753.1-201ENST00000635724 168 ntBASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.44□□□□□ -1.54
ZC3H4Q9UPT8 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 CPHL1P-201ENST00000461341 3407 ntBASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 RNA5SP119-201ENST00000362715 117 ntBASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 Y_RNA.122-201ENST00000363331 96 ntBASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 RNU6-1020P-201ENST00000363684 107 ntBASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 RNU5E-7P-201ENST00000365290 117 ntBASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 Y_RNA.626-201ENST00000411288 95 ntBASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 MTCO1P39-201ENST00000426148 480 ntBASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 RPL21P13-201ENST00000488305 481 ntBASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 RNU6-1256P-201ENST00000516539 103 ntBASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 RNU6-1012P-201ENST00000516606 109 ntBASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 AC022559.1-201ENST00000520905 205 ntBASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 IFITM8P-201ENST00000522529 394 ntBASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 AP004371.1-201ENST00000525240 214 ntBASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.43□□□□□ -1.54
ZC3H4Q9UPT8 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 RNU6-335P-201ENST00000364563 113 ntBASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 RNA5SP189-201ENST00000364920 115 ntBASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 BTF3L4P2-201ENST00000392798 346 ntBASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 Z82188.1-201ENST00000436709 154 ntBASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 HSPE1P25-201ENST00000455484 251 ntBASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 RPS26P21-201ENST00000475397 348 ntBASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 SNORA74D-201ENST00000516404 141 ntBASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 SNORA31.19-201ENST00000517079 126 ntBASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 SNRPGP15-201ENST00000600149 222 ntBASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 AL645944.1-201ENST00000603857 493 ntBASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 AC004832.4-201ENST00000608952 331 ntBASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 AC084757.4-201ENST00000616350 526 ntBASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 AL031595.2-201ENST00000624215 19071 ntBASIC5.42□□□□□ -1.54
ZC3H4Q9UPT8 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 AL365440.1-201ENST00000436135 2167 ntBASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 Z82217.1-201ENST00000625157 8149 ntBASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 RNU6-1301P-201ENST00000362724 104 ntBASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 MIR3065-201ENST00000390137 79 ntBASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 RPL21P65-201ENST00000406094 466 ntBASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 RPS29P7-201ENST00000439662 171 ntBASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 FABP5P15-201ENST00000453566 214 ntBASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 RPL23AP53-201ENST00000521854 457 ntBASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 AP006245.1-201ENST00000522549 120 ntBASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 AP004242.1-201ENST00000533701 349 ntBASIC5.41□□□□□ -1.54
ZC3H4Q9UPT8 AC079587.1-201ENST00000603846 277 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms