Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 MED13P1-201ENST00000428342 171 ntBASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 AL353705.1-201ENST00000433468 480 ntBASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 NEFMP1-201ENST00000443423 1006 ntBASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 MTND1P17-201ENST00000448961 204 ntBASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 YWHAEP4-201ENST00000505390 198 ntBASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 AC087441.2-201ENST00000529141 262 ntBASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 AL118558.2-201ENST00000556294 238 ntBASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 AC138761.3-201ENST00000579993 334 ntBASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 COX6CP3-201ENST00000580869 223 ntBASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 AL365265.1-201ENST00000621045 234 ntBASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 MIR4679-1-201ENST00000637619 75 ntBASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 FAM35BP-202ENST00000497389 3337 ntBASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.23□□□□□ -1.57
COL17A1Q9UMD9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 HSPE1P11-201ENST00000339579 310 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 Y_RNA.65-201ENST00000362846 100 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 RNU1-18P-201ENST00000363062 164 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 RNA5SP391-201ENST00000363456 119 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 Y_RNA.404-201ENST00000383978 102 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 Y_RNA.473-201ENST00000384333 102 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 MIR558-201ENST00000384920 94 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 RNU6-1154P-201ENST00000391001 104 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 RNU2-29P-201ENST00000410423 189 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 Y_RNA.793-201ENST00000411222 111 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 AC073910.1-201ENST00000445047 438 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 AC112492.4-201ENST00000456549 352 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 RNU6-475P-201ENST00000516073 104 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 Y_RNA.715-201ENST00000517082 110 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 AP000857.1-201ENST00000532151 543 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 AP000763.2-201ENST00000540641 163 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 MIR4769-201ENST00000584126 77 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 BNIP3P25-201ENST00000596023 559 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 AC123768.4-201ENST00000616244 701 ntBASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL17A1Q9UMD9 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL17A1Q9UMD9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.21□□□□□ -1.57
COL17A1Q9UMD9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL17A1Q9UMD9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL17A1Q9UMD9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.21□□□□□ -1.57
COL17A1Q9UMD9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
COL17A1Q9UMD9 RNU6-1243P-201ENST00000364028 107 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 SNORD50.2-201ENST00000365465 70 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 SNORD82-201ENST00000365530 70 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 RNU6-641P-201ENST00000384006 107 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 RNU6-44P-201ENST00000384045 107 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 AL356535.1-201ENST00000440335 398 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 HMGB3P30-201ENST00000457863 606 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 S100A11P1-201ENST00000477525 312 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 MRPL42P6-201ENST00000486397 371 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 AC107393.1-201ENST00000512403 346 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 Z98751.3-201ENST00000604447 521 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 AC245517.5-201ENST00000611529 162 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 AL606534.2-204ENST00000635008 178 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 U6.114-201ENST00000636407 96 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 AC004972.1-201ENST00000623934 2209 ntBASIC5.21□□□□□ -1.58
COL17A1Q9UMD9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 SNORD3E-201ENST00000362899 217 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 RNA5SP197-201ENST00000363357 119 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 RNU6-1293P-201ENST00000384077 107 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 Y_RNA.577-201ENST00000384794 101 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 HLFP1-201ENST00000402375 499 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AP000942.1-201ENST00000463969 747 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 RPL30P11-201ENST00000495304 339 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AC116562.3-201ENST00000506136 177 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 RNU6-313P-201ENST00000516317 112 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 RNU6-479P-201ENST00000516348 105 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 RNU6-256P-201ENST00000516747 97 ntBASIC5.2□□□□□ -1.58
COL17A1Q9UMD9 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms