Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 AL109620.1-201ENST00000618738 1197 ntBASIC1.53□□□□□ -2.16
RPUSD1Q9UJJ7 uc_338.20-201ENST00000621563 178 ntBASIC1.53□□□□□ -2.16
RPUSD1Q9UJJ7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.53□□□□□ -2.17
RPUSD1Q9UJJ7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.17
RPUSD1Q9UJJ7 AC092125.1-201ENST00000562568 1995 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 MIR378A-201ENST00000362177 66 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 SNORA16.1-201ENST00000364597 132 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AL512604.1-201ENST00000404812 257 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 RNA5SP489-201ENST00000410986 109 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AL030996.1-201ENST00000411430 235 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AIMP1P2-201ENST00000425294 312 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AC003989.2-201ENST00000440224 169 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AC092001.1-201ENST00000453012 261 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 MTCO1P42-201ENST00000457379 726 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AC055855.1-201ENST00000489563 579 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AC008526.1-201ENST00000509149 338 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 SMURF2P1-201ENST00000514992 481 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 RNU6-581P-201ENST00000516214 105 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AC007375.1-201ENST00000554513 578 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 MIR4529-201ENST00000578110 78 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 MIR4287-201ENST00000579398 78 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 MTCYBP22-201ENST00000603788 447 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AC068276.1-201ENST00000605793 379 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 U4atac.1-201ENST00000618345 95 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 AC008555.8-201ENST00000623602 2168 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 WWP1P1-201ENST00000466609 2769 ntBASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RPUSD1Q9UJJ7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 RNU6-188P-201ENST00000364207 107 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 Y_RNA.355-201ENST00000365462 98 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 MIR499A-201ENST00000384903 122 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AC119751.3-201ENST00000399720 670 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 NDUFS5P1-201ENST00000405668 289 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 USP9YP6-201ENST00000413550 854 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 ZNF90P2-204ENST00000419323 1075 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 HMGB1P27-201ENST00000431429 603 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 PMCHL2-203ENST00000457791 237 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 MRPS33P3-201ENST00000513456 322 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 MTCYBP43-201ENST00000513621 740 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 SNORA25.11-201ENST00000515935 105 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 RNU6-1183P-201ENST00000517054 60 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 ANP32BP3-201ENST00000559213 706 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AL049838.1-201ENST00000563647 981 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AC090079.2-201ENST00000575289 768 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AL138963.2-201ENST00000605137 226 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AC112220.3-201ENST00000605502 502 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AF129408.1-201ENST00000608767 431 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AC018645.2-201ENST00000609151 472 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AC009233.1-201ENST00000616477 371 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AC099654.8-201ENST00000637757 681 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AC131280.1-202ENST00000624067 4211 ntBASIC1.51□□□□□ -2.17
RPUSD1Q9UJJ7 AL354685.2-201ENST00000448218 1447 ntBASIC1.5□□□□□ -2.17
RPUSD1Q9UJJ7 RNU6-1284P-201ENST00000363701 100 ntBASIC1.5□□□□□ -2.17
RPUSD1Q9UJJ7 MIR676-201ENST00000390702 67 ntBASIC1.5□□□□□ -2.17
RPUSD1Q9UJJ7 OR51A5P-201ENST00000415429 942 ntBASIC1.5□□□□□ -2.17
RPUSD1Q9UJJ7 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.5□□□□□ -2.17
RPUSD1Q9UJJ7 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.5□□□□□ -2.17
RPUSD1Q9UJJ7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.5□□□□□ -2.17
RPUSD1Q9UJJ7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.5□□□□□ -2.17
RPUSD1Q9UJJ7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.5□□□□□ -2.17
RPUSD1Q9UJJ7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.5□□□□□ -2.17
RPUSD1Q9UJJ7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.5□□□□□ -2.17
RPUSD1Q9UJJ7 AC245517.4-201ENST00000448601 281 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms