Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.92□□□□□ -1.78
USP25Q9UHP3 CYCSP4-201ENST00000429682 331 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 HMGB3P11-201ENST00000440127 604 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 NOTCH2P1-201ENST00000443481 624 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.92□□□□□ -1.78
USP25Q9UHP3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.92□□□□□ -1.78
USP25Q9UHP3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.92□□□□□ -1.78
USP25Q9UHP3 RPL21P8-201ENST00000465083 535 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.92□□□□□ -1.78
USP25Q9UHP3 RNU6-928P-201ENST00000516876 104 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 RNA5SP471-201ENST00000516971 106 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 SNORA25.17-201ENST00000517184 124 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 RNA5SP380-201ENST00000517190 98 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 RNU1-45P-201ENST00000517191 141 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 RANP3-201ENST00000530970 276 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 AP003072.1-201ENST00000531740 145 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 OR11H5P-201ENST00000554039 926 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 POLR3GP2-201ENST00000588366 668 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.92□□□□□ -1.78
USP25Q9UHP3 MIR7851-201ENST00000610611 160 ntBASIC3.92□□□□□ -1.78
USP25Q9UHP3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.92□□□□□ -1.78
USP25Q9UHP3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USP25Q9UHP3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.92□□□□□ -1.78
USP25Q9UHP3 AC017071.1-201ENST00000564407 2204 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.91□□□□□ -1.78
USP25Q9UHP3 AL079305.1-201ENST00000623159 3008 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 RNU6-512P-201ENST00000364438 103 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 Y_RNA.339-201ENST00000365325 102 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 CYCSP19-201ENST00000411715 316 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 AL035423.1-201ENST00000420331 213 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.91□□□□□ -1.78
USP25Q9UHP3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.91□□□□□ -1.78
USP25Q9UHP3 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 AC083904.1-201ENST00000487828 231 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 TRBVA-201ENST00000498804 316 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.91□□□□□ -1.78
USP25Q9UHP3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.91□□□□□ -1.78
USP25Q9UHP3 RNU6-1038P-201ENST00000516516 104 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 RNU6-143P-201ENST00000516942 93 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 RNU6-711P-201ENST00000517255 106 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 AP005597.4-201ENST00000526762 229 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 AP000889.2-201ENST00000532684 490 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.91□□□□□ -1.78
USP25Q9UHP3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.91□□□□□ -1.78
USP25Q9UHP3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.91□□□□□ -1.78
USP25Q9UHP3 MTCO3P13-201ENST00000577757 781 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 AC012409.4-201ENST00000612923 249 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 uc_338.15-201ENST00000615470 191 ntBASIC3.91□□□□□ -1.78
USP25Q9UHP3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
USP25Q9UHP3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.91□□□□□ -1.78
USP25Q9UHP3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP25Q9UHP3 AC032011.1-201ENST00000611703 1549 ntBASIC3.9□□□□□ -1.78
USP25Q9UHP3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP25Q9UHP3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP25Q9UHP3 MIR148B-201ENST00000362252 99 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 Y_RNA.138-201ENST00000363462 102 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 SNORD113-7-201ENST00000363762 77 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
USP25Q9UHP3 RNU6-1127P-201ENST00000384580 107 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 MIR670-201ENST00000390142 98 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
USP25Q9UHP3 RNA5SP171-201ENST00000391071 115 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 POLHP1-201ENST00000411806 470 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 VN1R36P-201ENST00000414936 291 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 GPM6BP2-201ENST00000432046 144 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 AL591212.2-201ENST00000433923 257 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 GPM6BP1-201ENST00000446387 144 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 FABP5P13-201ENST00000452144 328 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 AP002884.2-201ENST00000471647 395 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.9□□□□□ -1.79
USP25Q9UHP3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.9□□□□□ -1.79
USP25Q9UHP3 RN7SKP18-201ENST00000516005 275 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 AC107934.2-201ENST00000518653 310 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.9□□□□□ -1.79
USP25Q9UHP3 MIR3942-201ENST00000585264 109 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 AC103705.1-201ENST00000619013 241 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.9□□□□□ -1.79
USP25Q9UHP3 SRP72P2-201ENST00000344851 1979 ntBASIC3.9□□□□□ -1.79
USP25Q9UHP3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
USP25Q9UHP3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP25Q9UHP3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
USP25Q9UHP3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.9□□□□□ -1.79
USP25Q9UHP3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.9□□□□□ -1.79
USP25Q9UHP3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP25Q9UHP3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.89□□□□□ -1.79
USP25Q9UHP3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP25Q9UHP3 FTLP6-201ENST00000355274 422 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 Y_RNA.212-201ENST00000364177 102 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP25Q9UHP3 EIF4E2P1-201ENST00000393781 255 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 PTMAP2-201ENST00000397627 327 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 MIR548K-201ENST00000408406 116 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 RNU6ATAC-201ENST00000408749 126 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 RPL7P10-201ENST00000417407 739 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 AC007389.2-201ENST00000434630 306 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.89□□□□□ -1.79
USP25Q9UHP3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.89□□□□□ -1.79
USP25Q9UHP3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.89□□□□□ -1.79
USP25Q9UHP3 RPS15AP27-201ENST00000449183 343 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms