Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC087045.1-201ENST00000605856 382 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.66□□□□□ -2.14
VAPAQ9P0L0 Z99571.1-201ENST00000636677 394 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AC106858.1-201ENST00000637497 429 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 AC008555.8-201ENST00000623602 2168 ntBASIC1.66□□□□□ -2.14
VAPAQ9P0L0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
VAPAQ9P0L0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.65□□□□□ -2.15
VAPAQ9P0L0 AC138393.1-203ENST00000327086 343 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 RNU1-23P-201ENST00000363361 144 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 RNU5A-8P-201ENST00000364102 114 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 SNORD116.1-201ENST00000365628 92 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 MIR518A2-201ENST00000384966 87 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 MIR1294-201ENST00000408503 142 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 VPS26BP1-201ENST00000417155 755 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.65□□□□□ -2.15
VAPAQ9P0L0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.65□□□□□ -2.15
VAPAQ9P0L0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.65□□□□□ -2.15
VAPAQ9P0L0 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.65□□□□□ -2.15
VAPAQ9P0L0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.65□□□□□ -2.15
VAPAQ9P0L0 AC104982.1-201ENST00000478775 574 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 AC117522.2-201ENST00000510049 657 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.65□□□□□ -2.15
VAPAQ9P0L0 HSPE1P18-201ENST00000517602 280 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.65□□□□□ -2.15
VAPAQ9P0L0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.65□□□□□ -2.15
VAPAQ9P0L0 DUXAP1-201ENST00000556632 463 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 AC110588.1-201ENST00000559699 137 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 AC104581.2-201ENST00000572227 430 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.65□□□□□ -2.15
VAPAQ9P0L0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
VAPAQ9P0L0 AC107952.2-201ENST00000606048 486 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 AC008121.3-201ENST00000618726 433 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 AC006386.1-201ENST00000619436 415 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 AL138955.1-201ENST00000622881 1040 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 AL512643.1-201ENST00000635735 524 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
VAPAQ9P0L0 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.65□□□□□ -2.15
VAPAQ9P0L0 TEX21P-201ENST00000447107 1476 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 RNU6-1000P-201ENST00000391066 106 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AC127391.1-201ENST00000411737 98 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.64□□□□□ -2.15
VAPAQ9P0L0 RPL23AP39-201ENST00000415533 405 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AL645568.3-201ENST00000433683 316 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.64□□□□□ -2.15
VAPAQ9P0L0 EEF1A1P39-201ENST00000440791 250 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AC108059.3-201ENST00000456388 214 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AC091965.2-201ENST00000512324 613 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 RNU5B-3P-201ENST00000516601 115 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 MTND1P36-201ENST00000522384 936 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AC084851.1-201ENST00000529105 249 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 OR5B19P-201ENST00000531766 928 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AC074050.1-201ENST00000563247 211 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AC026271.5-201ENST00000577873 130 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AL358072.1-201ENST00000604156 575 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AC007363.1-201ENST00000604736 620 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AC097468.3-201ENST00000607956 456 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AL773524.1-201ENST00000614065 229 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.64□□□□□ -2.15
VAPAQ9P0L0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AC092881.1-201ENST00000638218 2733 ntBASIC1.64□□□□□ -2.15
VAPAQ9P0L0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.63□□□□□ -2.15
VAPAQ9P0L0 AL356432.1-201ENST00000405809 419 ntBASIC1.63□□□□□ -2.15
VAPAQ9P0L0 RPS12P24-201ENST00000412619 387 ntBASIC1.63□□□□□ -2.15
VAPAQ9P0L0 AL158823.1-201ENST00000418441 478 ntBASIC1.63□□□□□ -2.15
VAPAQ9P0L0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.63□□□□□ -2.15
VAPAQ9P0L0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.63□□□□□ -2.15
VAPAQ9P0L0 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.63□□□□□ -2.15
VAPAQ9P0L0 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.63□□□□□ -2.15
VAPAQ9P0L0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.63□□□□□ -2.15
VAPAQ9P0L0 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.63□□□□□ -2.15
VAPAQ9P0L0 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.63□□□□□ -2.15
VAPAQ9P0L0 FAM92A1P2-202ENST00000504766 877 ntBASIC1.63□□□□□ -2.15
VAPAQ9P0L0 AC010587.2-201ENST00000511727 448 ntBASIC1.63□□□□□ -2.15
VAPAQ9P0L0 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.63□□□□□ -2.15
VAPAQ9P0L0 RNU6-467P-201ENST00000517027 110 ntBASIC1.63□□□□□ -2.15
VAPAQ9P0L0 SNORA31.19-201ENST00000517079 126 ntBASIC1.63□□□□□ -2.15
VAPAQ9P0L0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
VAPAQ9P0L0 AP005639.2-201ENST00000527592 928 ntBASIC1.63□□□□□ -2.15
VAPAQ9P0L0 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.63□□□□□ -2.15
VAPAQ9P0L0 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.63□□□□□ -2.15
VAPAQ9P0L0 MTND3P19-201ENST00000603825 345 ntBASIC1.63□□□□□ -2.15
VAPAQ9P0L0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.63□□□□□ -2.15
VAPAQ9P0L0 AC013437.2-201ENST00000639587 677 ntBASIC1.63□□□□□ -2.15
VAPAQ9P0L0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
VAPAQ9P0L0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.62□□□□□ -2.15
VAPAQ9P0L0 MIR518D-201ENST00000385014 87 ntBASIC1.62□□□□□ -2.15
VAPAQ9P0L0 SNORA40.4-201ENST00000390971 128 ntBASIC1.62□□□□□ -2.15
VAPAQ9P0L0 RNU6-817P-201ENST00000391083 104 ntBASIC1.62□□□□□ -2.15
VAPAQ9P0L0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
VAPAQ9P0L0 AC019129.1-201ENST00000403786 261 ntBASIC1.62□□□□□ -2.15
VAPAQ9P0L0 RPS20P15-201ENST00000412792 311 ntBASIC1.62□□□□□ -2.15
VAPAQ9P0L0 PGBD4P6-201ENST00000421501 610 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms