Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 LINC00933-203ENST00000559812 219 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 AC012213.3-201ENST00000577199 777 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 MIR4287-201ENST00000579398 78 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 AL391813.2-201ENST00000609113 322 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 AL365204.3-201ENST00000612448 685 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 AL050303.3-201ENST00000613704 284 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 uc_338.12-201ENST00000616344 181 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 AC009831.4-201ENST00000620744 325 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 MIR6873-201ENST00000622788 63 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 AC138627.2-201ENST00000624202 601 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 MTND5P42-201ENST00000637720 498 ntBASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.06□□□□□ -2.08
KLHL28Q9NXS3 SMIM11P1-201ENST00000369586 178 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 Y_RNA.534-201ENST00000384599 112 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 SNORA48.3-201ENST00000391081 134 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 CR769776.1-201ENST00000441254 787 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AL606517.1-201ENST00000446914 387 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 MTCO1P42-201ENST00000457379 726 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 PMCHL2-203ENST00000457791 237 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AC023194.1-201ENST00000493084 308 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AC020699.1-201ENST00000505161 445 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AC107222.1-201ENST00000510899 637 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 RNU5A-4P-201ENST00000516588 111 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 RNU6-1003P-201ENST00000517099 105 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 RNU2-19P-201ENST00000517288 84 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AP001372.4-201ENST00000524889 472 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AP000873.5-201ENST00000533906 236 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AC079598.5-201ENST00000547460 117 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 ARL2BPP2-201ENST00000550907 489 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 MIR4529-201ENST00000578110 78 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 MIR4648-201ENST00000580107 72 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AC034229.4-201ENST00000607861 441 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AC108747.1-201ENST00000609508 535 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AL160394.1-201ENST00000624765 724 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 AL512643.1-201ENST00000635735 524 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.05□□□□□ -2.08
KLHL28Q9NXS3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 RNU1-72P-201ENST00000362976 153 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 RNU6-511P-201ENST00000363496 107 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 RNA5SP37-201ENST00000365420 130 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 RNU6-898P-201ENST00000365627 104 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 MIR518D-201ENST00000385014 87 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 MIR301A-201ENST00000385261 86 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 ZNF876P-202ENST00000398732 1485 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 RPS20P2-201ENST00000402520 389 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 FCF1P10-201ENST00000407590 479 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 RNU2-36P-201ENST00000410361 191 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 MTND1P23-201ENST00000416931 372 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AL353621.1-201ENST00000418219 243 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AL022400.1-201ENST00000423946 935 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 MTND1P20-201ENST00000430341 950 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AL591704.1-201ENST00000432574 275 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 RPL7P34-201ENST00000433316 712 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 RPS15AP9-201ENST00000439856 381 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 RPL7P12-201ENST00000446719 750 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 FDX1P2-201ENST00000450769 375 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AC107032.1-201ENST00000485945 480 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AC011005.2-201ENST00000487324 359 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 SNORA25.11-201ENST00000515935 105 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 RNA5SP200-201ENST00000516360 103 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 SNORA31.19-201ENST00000517079 126 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 RNU6-201P-201ENST00000517100 61 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AC123904.2-201ENST00000548059 300 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 LRRC37A5P-203ENST00000580181 585 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AL355297.2-201ENST00000604792 129 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AC107952.2-201ENST00000606048 486 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AL607023.1-201ENST00000620045 248 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 SDR42E1P4-201ENST00000620894 481 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 AL589994.2-201ENST00000621124 579 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms