Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL109809.4-201ENST00000603520 2185 ntBASIC3.04□□□□□ -1.92
BLOC1S4Q9NUP1 AC093010.3-201ENST00000570269 15214 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 AC135776.4-201ENST00000624300 1904 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 AC138393.1-203ENST00000327086 343 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 SNORD115-7-201ENST00000365306 82 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 Y_RNA.553-201ENST00000384670 102 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 Y_RNA.576-201ENST00000384781 102 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 U3.37-201ENST00000408528 213 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 RNA5SP21-201ENST00000410917 96 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 TOMM20P4-201ENST00000427861 435 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 AC104058.1-201ENST00000448028 297 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 MTCYBP1-201ENST00000454315 1119 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 AC006026.2-201ENST00000457376 180 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 RN7SL297P-201ENST00000483161 293 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 AC022493.1-201ENST00000492984 337 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 AC010424.1-201ENST00000506336 297 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 RBBP4P6-201ENST00000508098 202 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 AC104806.1-201ENST00000508720 308 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 RN7SKP298-201ENST00000515950 94 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 SNORA31.6-201ENST00000516241 130 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 SCARNA3-201ENST00000517097 143 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 AC090616.3-201ENST00000582184 217 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 RPL23AP88-201ENST00000605759 454 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 AC099842.1-201ENST00000619919 596 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 AC092656.1-203ENST00000624134 423 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 AC009161.2-201ENST00000624626 138 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 CKAP2P1-201ENST00000555477 2049 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 AC080128.1-201ENST00000474389 1917 ntBASIC3.03□□□□□ -1.92
BLOC1S4Q9NUP1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AC108206.1-201ENST00000570186 4159 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 RNU6-1287P-201ENST00000362914 107 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 RNU6-181P-201ENST00000363225 107 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 RNU1-100P-201ENST00000365255 165 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 RNU6-1060P-201ENST00000384664 107 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 RNU6-1179P-201ENST00000384667 107 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AL356057.3-201ENST00000402607 340 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 SNORD88.1-201ENST00000408684 91 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 OR6C66P-201ENST00000414917 930 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AC105272.1-201ENST00000438604 198 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 RPS15AP9-201ENST00000439856 381 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 MRPL50P4-201ENST00000446432 475 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AC079448.1-201ENST00000449377 373 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 EEF1B2P7-201ENST00000451177 676 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 RPL9P33-201ENST00000484311 566 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 FAM92A1P2-202ENST00000504766 877 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 MTND4P2-201ENST00000507767 1203 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AC023141.11-201ENST00000508864 202 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 RNU6-445P-201ENST00000516949 107 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AP002963.1-201ENST00000530590 184 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 EIF4BP1-201ENST00000554881 351 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AC092325.1-201ENST00000566449 554 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 MIR4528-201ENST00000577763 90 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 DEFB131E-202ENST00000602581 683 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AL670379.10-201ENST00000604330 253 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AL670379.9-201ENST00000605428 253 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AC069234.5-201ENST00000611056 416 ntBASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.02□□□□□ -1.93
BLOC1S4Q9NUP1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 RNU4-48P-201ENST00000365559 182 ntBASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 RNU1-109P-201ENST00000383960 147 ntBASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 RNU6-348P-201ENST00000384386 107 ntBASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 AL360182.1-201ENST00000397433 468 ntBASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 AC096664.2-201ENST00000411843 406 ntBASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 BX276092.3-201ENST00000424182 230 ntBASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 C1DP4-201ENST00000455429 424 ntBASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 AC080013.2-201ENST00000460866 323 ntBASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 AC097462.2-201ENST00000504623 481 ntBASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 RNA5SP503-201ENST00000517047 117 ntBASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 AP004607.1-201ENST00000524456 203 ntBASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.01□□□□□ -1.93
BLOC1S4Q9NUP1 AC073648.5-201ENST00000603502 305 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 187.5 ms