Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AL109620.1-201ENST00000618738 1197 ntBASIC0.51□□□□□ -2.33
CDC42SE2Q9NRR3 AC017037.3-201ENST00000625016 472 ntBASIC0.51□□□□□ -2.33
CDC42SE2Q9NRR3 AC008163.1-202ENST00000636004 2889 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 RNU1-58P-201ENST00000362413 163 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 SNORD1A-201ENST00000364968 72 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 RNU1-36P-201ENST00000365130 165 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 RNU6-1080P-201ENST00000383982 107 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 MIR1267-201ENST00000408723 78 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 RN7SKP284-201ENST00000411002 343 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 AL136133.1-201ENST00000413694 376 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 CYCSP33-201ENST00000414485 327 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 PIGFP2-201ENST00000421400 651 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 AL606490.4-201ENST00000423117 127 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 PTGES3P4-201ENST00000426243 356 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 AL353706.1-201ENST00000436728 494 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 AC092473.1-201ENST00000441098 221 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 AC114982.1-201ENST00000469402 321 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 AC079140.2-201ENST00000506193 142 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 ROCK1P1-201ENST00000573767 549 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 MIR3973-201ENST00000579824 107 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 AC008945.2-201ENST00000606056 604 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 MIR8063-201ENST00000621930 81 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 AC092125.1-201ENST00000562568 1995 ntBASIC0.5□□□□□ -2.33
CDC42SE2Q9NRR3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 RNU1-124P-201ENST00000363861 145 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 RNU6-392P-201ENST00000364926 101 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 RNU6-968P-201ENST00000384076 107 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 MIR222-201ENST00000384992 110 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 MIR100-201ENST00000385259 80 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 SNORA48.1-201ENST00000390879 135 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 NCOR1P3-201ENST00000420479 303 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 PPP1R11P2-201ENST00000423543 382 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 SKA2P1-201ENST00000425592 390 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 MTND5P15-201ENST00000434246 349 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 AC027119.1-201ENST00000440877 241 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 RPS4XP11-201ENST00000446897 772 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 AL441985.1-201ENST00000457727 251 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 RPS20P20-201ENST00000460498 340 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 ACA64.5-201ENST00000516207 127 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 SCARNA16.2-201ENST00000516520 172 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 RNU6-113P-201ENST00000516653 101 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 PSMA3P-201ENST00000555485 635 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 VN1R88P-201ENST00000596787 292 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 AL391646.1-201ENST00000603860 190 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 AL021879.1-201ENST00000611756 288 ntBASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CDC42SE2Q9NRR3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 HSBP1P2-201ENST00000299671 229 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 AL161781.1-201ENST00000354277 403 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 SNORD33-201ENST00000362761 85 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 RNU6-414P-201ENST00000363705 104 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 SNORD14D-201ENST00000384390 87 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 FGF7P8-201ENST00000402994 292 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 RNU2-64P-201ENST00000411315 191 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 AC127391.1-201ENST00000411737 98 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 AC006461.1-201ENST00000412637 326 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 AC139712.2-201ENST00000424302 339 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 PSMA6P3-201ENST00000428242 164 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 PTGES3P1-201ENST00000439531 483 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 RPL21P47-201ENST00000483696 477 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 COPS8P3-201ENST00000526024 482 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 AP000907.2-201ENST00000530827 353 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 LINC00557-201ENST00000563184 1279 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 BNIP3P27-201ENST00000599991 412 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 AC011939.3-201ENST00000613686 466 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 AC099654.5-201ENST00000636479 350 ntBASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
CDC42SE2Q9NRR3 AL138713.1-201ENST00000624026 2130 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 MIR302D-201ENST00000362275 68 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 RNU6-778P-201ENST00000363269 103 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 MIR1262-201ENST00000408276 93 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 USP9YP33-201ENST00000412220 421 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 MTCYBP38-201ENST00000417160 1123 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 AL353621.1-201ENST00000418219 243 ntBASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.47□□□□□ -2.33
CDC42SE2Q9NRR3 AC004941.2-201ENST00000427009 228 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms