Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.61□□□□□ -2.15
VCX3AQ9NNX9 AC093249.1-201ENST00000567049 203 ntBASIC1.61□□□□□ -2.15
VCX3AQ9NNX9 MIR544B-201ENST00000582372 78 ntBASIC1.61□□□□□ -2.15
VCX3AQ9NNX9 AC005000.2-201ENST00000605468 310 ntBASIC1.61□□□□□ -2.15
VCX3AQ9NNX9 AL359314.1-201ENST00000616913 261 ntBASIC1.61□□□□□ -2.15
VCX3AQ9NNX9 AL136981.2-201ENST00000617319 734 ntBASIC1.61□□□□□ -2.15
VCX3AQ9NNX9 AP000648.3-201ENST00000623539 4507 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 Y_RNA.126-201ENST00000363382 111 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 RNU6-769P-201ENST00000384407 104 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 MIR1305-201ENST00000408300 86 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 RPS3AP25-201ENST00000411660 793 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 TIMM9P1-201ENST00000436122 256 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 EEF1A1P39-201ENST00000440791 250 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 AC091965.2-201ENST00000512324 613 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 RNU4-29P-201ENST00000515943 174 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 RNU6-467P-201ENST00000517027 110 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 RNU6-586P-201ENST00000517265 104 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 AC023813.2-201ENST00000564321 469 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 BNIP3P25-201ENST00000596023 559 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 CLIC4P2-201ENST00000601934 717 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 SNRPGP19-201ENST00000603826 189 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 AL109618.2-201ENST00000605527 211 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 AL442067.2-201ENST00000614033 363 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 AL356596.1-201ENST00000624230 379 ntBASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.6□□□□□ -2.15
VCX3AQ9NNX9 MTND5P6-201ENST00000422338 1798 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 SNORD114-19-201ENST00000363072 75 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 SMIM11P1-201ENST00000369586 178 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 RN7SKP51-201ENST00000410781 304 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 AC016831.2-201ENST00000417179 352 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 RPS3AP37-201ENST00000419176 745 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 BX510359.4-201ENST00000423750 193 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 RAC1P6-201ENST00000423911 575 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 HMGN2P3-201ENST00000433603 273 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 HMGN2P5-201ENST00000436882 273 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 MTND2P29-201ENST00000438595 412 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 AL358794.1-201ENST00000445689 381 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 SNORA84-201ENST00000459229 133 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 FAM133DP-201ENST00000464802 691 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 AC106872.3-201ENST00000495104 446 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 SLC25A15P5-201ENST00000508033 253 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 IMMP1LP2-201ENST00000552954 492 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 AL356432.3-201ENST00000568952 465 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 SEPT7P9-203ENST00000604116 343 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 AC021646.1-201ENST00000605469 484 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 AC112220.3-201ENST00000605502 502 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 AC093788.1-201ENST00000609356 927 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 AL589994.2-201ENST00000621124 579 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 AL138955.1-201ENST00000622881 1040 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 AL138960.2-201ENST00000625145 535 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 MTND5P42-201ENST00000637720 498 ntBASIC1.59□□□□□ -2.15
VCX3AQ9NNX9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 RNU6-858P-201ENST00000362436 107 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 RNU5E-1-201ENST00000362477 120 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 RNU6-723P-201ENST00000383973 107 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 MIR301A-201ENST00000385261 86 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 RNU6-1000P-201ENST00000391066 106 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 AC019129.1-201ENST00000403786 261 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 MIR1262-201ENST00000408276 93 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 RNU6-1025P-201ENST00000410629 104 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 MTCO2P20-201ENST00000437339 673 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 RNU6-953P-201ENST00000459154 107 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 RNU6-1315P-201ENST00000517187 99 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 EEF1A1P37-201ENST00000522748 715 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 GNAI2P1-201ENST00000541815 315 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 ARL2BPP2-201ENST00000550907 489 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 AC022254.1-201ENST00000567857 235 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 AC104581.2-201ENST00000572227 430 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 RNU6-88P-201ENST00000606801 100 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 AC103810.8-201ENST00000607347 118 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 AC098614.4-201ENST00000607601 462 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 AC072039.2-201ENST00000608883 439 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 AC096772.1-201ENST00000609146 564 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 AC130324.3-201ENST00000614165 542 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 AL731566.2-201ENST00000618971 317 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 MIR6075-201ENST00000620782 95 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 RBBP8P1-201ENST00000449447 1844 ntBASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.58□□□□□ -2.16
VCX3AQ9NNX9 RNU6-433P-201ENST00000363216 104 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms