Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AC092634.2-201ENST00000428146 1010 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 GXYLT1P1-201ENST00000446657 490 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AC017099.1-201ENST00000448261 1028 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AL441985.1-201ENST00000457727 251 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AC107032.1-201ENST00000485945 480 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 RNA5SP445-201ENST00000515889 115 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AP004247.1-201ENST00000531556 1289 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AL390208.1-201ENST00000605885 644 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 MIR3199-2-201ENST00000636243 86 ntBASIC1.05□□□□□ -2.24
KIAA1549Q9HCM3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 SNORA23-201ENST00000365128 182 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 HMGN2P39-201ENST00000398005 273 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 HMGB1P17-201ENST00000403495 628 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 MTCYBP38-201ENST00000417160 1123 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 USP9YP26-201ENST00000421008 661 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 DPRXP1-201ENST00000426312 460 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 RAC1P8-201ENST00000427086 527 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 AL161788.1-201ENST00000441805 169 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 ARL2BPP4-201ENST00000506854 471 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 SNORA25.11-201ENST00000515935 105 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 AL121821.2-201ENST00000556081 394 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 AL359212.1-201ENST00000556608 614 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 AC008269.2-201ENST00000561915 1105 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 AC090615.1-201ENST00000577519 154 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 SNORA4-201ENST00000584302 138 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 RMST_2.1-201ENST00000617263 136 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 AC008121.3-201ENST00000618726 433 ntBASIC1.04□□□□□ -2.24
KIAA1549Q9HCM3 RNU5E-8P-201ENST00000363502 116 ntBASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 MIR758-201ENST00000390227 88 ntBASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 AL590084.1-201ENST00000407885 387 ntBASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 TPMTP2-201ENST00000414372 726 ntBASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 RPL23AP6-201ENST00000446637 472 ntBASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 MTND1P9-201ENST00000453775 944 ntBASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 RNU7-59P-201ENST00000459101 61 ntBASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 MRPS33P3-201ENST00000513456 322 ntBASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 AC022784.5-201ENST00000522241 437 ntBASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 AL161722.3-201ENST00000605789 2983 ntBASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 Z75746.1-201ENST00000440243 2080 ntBASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
KIAA1549Q9HCM3 RNU6-28P-201ENST00000362378 107 ntBASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 USP9YP18-201ENST00000425912 695 ntBASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 AP000949.1-201ENST00000438328 629 ntBASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 snoU13.8-201ENST00000458890 104 ntBASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 AC018437.1-201ENST00000492214 406 ntBASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 AP005660.1-201ENST00000522972 293 ntBASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 AP000907.2-201ENST00000530827 353 ntBASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 AC024619.4-201ENST00000580924 316 ntBASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 MTATP6P3-201ENST00000581686 676 ntBASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 AC126118.1-201ENST00000607744 628 ntBASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 AC009237.15-201ENST00000610252 501 ntBASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 AC253576.2-201ENST00000618815 580 ntBASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 AC019226.1-201ENST00000625666 515 ntBASIC1.03□□□□□ -2.25
KIAA1549Q9HCM3 AP000560.1-201ENST00000624150 1937 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 RNA5SP276-201ENST00000362580 94 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 RNU6-223P-201ENST00000362830 107 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 RNU1-93P-201ENST00000364704 169 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 RNU6-637P-201ENST00000384050 107 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 RNU6-1300P-201ENST00000391046 108 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 AC244636.1-201ENST00000421152 228 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 MTCO2P5-201ENST00000422621 426 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 RPL21P134-201ENST00000453468 483 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 AC055855.1-201ENST00000489563 579 ntBASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.02□□□□□ -2.25
KIAA1549Q9HCM3 Y_RNA.670-201ENST00000516255 105 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms