Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AL353729.1-201ENST00000425044 720 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AC133104.1-201ENST00000429100 218 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 HMGB1P9-201ENST00000429856 646 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AL358934.1-201ENST00000432346 324 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 RPS15AP5-201ENST00000436276 388 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.73□□□□□ -1.97
SNX25Q9H3E2 RPS15AP9-201ENST00000439856 381 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AC098831.1-201ENST00000440661 216 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 BRK1P2-201ENST00000442875 223 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AC132479.1-201ENST00000449160 144 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.73□□□□□ -1.97
SNX25Q9H3E2 CACYBPP2-201ENST00000453625 678 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AC116562.3-201ENST00000506136 177 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 RBBP4P6-201ENST00000508098 202 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AC114781.4-201ENST00000513707 639 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 RNU6-123P-201ENST00000516163 102 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 RNA5SP148-201ENST00000516527 94 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 RNU6-410P-201ENST00000517006 107 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 RNU6-1315P-201ENST00000517187 99 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AC068587.5-201ENST00000528506 175 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AC025281.1-201ENST00000567026 265 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AC010546.1-201ENST00000569391 485 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SNX25Q9H3E2 MIR3611-201ENST00000584484 83 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AL158032.1-201ENST00000605401 106 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AC013562.2-201ENST00000611632 603 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AL589743.7-201ENST00000612637 233 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.73□□□□□ -1.97
SNX25Q9H3E2 AC138649.3-201ENST00000622154 254 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SNX25Q9H3E2 MTND4P35-201ENST00000604257 1375 ntBASIC2.73□□□□□ -1.97
SNX25Q9H3E2 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.73□□□□□ -1.97
SNX25Q9H3E2 RNU6-1097P-201ENST00000363586 107 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 RNU4-40P-201ENST00000364351 143 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 RNU1-100P-201ENST00000365255 165 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 Z98749.2-208ENST00000381646 500 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 SNORA75B-201ENST00000384053 137 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 MIR1-2-201ENST00000384961 85 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 MIR301A-201ENST00000385261 86 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 RNU2-49P-201ENST00000410666 184 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 BTF3L4P1-201ENST00000413813 468 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.72□□□□□ -1.97
SNX25Q9H3E2 MTCO2P11-201ENST00000431069 680 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 MYL8P-204ENST00000431574 518 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 UBBP3-201ENST00000445497 241 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AC079781.2-201ENST00000446424 169 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AP000705.1-201ENST00000454567 350 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 C1DP4-201ENST00000455429 424 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AC027673.1-201ENST00000456245 405 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AC105313.1-201ENST00000509121 353 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 SNORD27.1-201ENST00000516319 72 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AC025755.1-201ENST00000521306 278 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 SUB1P1-201ENST00000524415 382 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.72□□□□□ -1.97
SNX25Q9H3E2 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AC234778.2-201ENST00000566241 354 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 MIR1273C-201ENST00000578669 77 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AC020895.1-201ENST00000595362 272 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AL139286.2-201ENST00000606838 396 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AC126118.1-201ENST00000607744 628 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AL359547.2-201ENST00000615810 418 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AC136475.10-201ENST00000620253 385 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 AC025034.2-201ENST00000623264 286 ntBASIC2.72□□□□□ -1.97
SNX25Q9H3E2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.71□□□□□ -1.97
SNX25Q9H3E2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
SNX25Q9H3E2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.71□□□□□ -1.98
SNX25Q9H3E2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
SNX25Q9H3E2 RNU6-658P-201ENST00000384606 106 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 MIR27B-201ENST00000385129 97 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SNX25Q9H3E2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.71□□□□□ -1.98
SNX25Q9H3E2 AC080125.1-201ENST00000414888 684 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.71□□□□□ -1.98
SNX25Q9H3E2 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.71□□□□□ -1.98
SNX25Q9H3E2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.71□□□□□ -1.98
SNX25Q9H3E2 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.71□□□□□ -1.98
SNX25Q9H3E2 HMGN2P10-201ENST00000448085 265 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 RPL31P41-201ENST00000477967 372 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 RPS15AP34-201ENST00000487776 387 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 AC098591.2-201ENST00000510152 315 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 RN7SKP24-201ENST00000515888 284 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 RNU6-1183P-201ENST00000517054 60 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.71□□□□□ -1.98
SNX25Q9H3E2 CKS1BP7-201ENST00000522230 235 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 ADI1P3-201ENST00000549509 470 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 NACAP3-201ENST00000552100 481 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.71□□□□□ -1.98
SNX25Q9H3E2 AC021739.1-201ENST00000559631 174 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms