Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 AC008121.3-201ENST00000618726 433 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.31□□□□□ -2.2
VCX3BQ9H321 AP001002.2-201ENST00000625137 386 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 DDX43P2-201ENST00000604753 1354 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
VCX3BQ9H321 ZNF680P1-201ENST00000436625 1469 ntBASIC1.31□□□□□ -2.2
VCX3BQ9H321 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
VCX3BQ9H321 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
VCX3BQ9H321 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
VCX3BQ9H321 RNU6-289P-201ENST00000364093 107 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 RNU6-777P-201ENST00000364265 104 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 RNU6-658P-201ENST00000384606 106 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 MIR583-201ENST00000384846 75 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 MIR1302-8-201ENST00000408342 128 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.3□□□□□ -2.2
VCX3BQ9H321 PTGES3P4-201ENST00000426243 356 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.3□□□□□ -2.2
VCX3BQ9H321 AC006946.1-201ENST00000429106 328 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 RPL36AP53-201ENST00000432891 316 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.3□□□□□ -2.2
VCX3BQ9H321 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.3□□□□□ -2.2
VCX3BQ9H321 MTCO2P20-201ENST00000437339 673 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 SNRPEP7-201ENST00000438350 220 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.3□□□□□ -2.2
VCX3BQ9H321 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.3□□□□□ -2.2
VCX3BQ9H321 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.3□□□□□ -2.2
VCX3BQ9H321 AC006512.1-201ENST00000468816 291 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 AC010631.1-201ENST00000474150 156 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 AC132942.1-201ENST00000486753 483 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 AC113347.3-201ENST00000509113 148 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 AC008837.2-201ENST00000513076 418 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.3□□□□□ -2.2
VCX3BQ9H321 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.3□□□□□ -2.2
VCX3BQ9H321 RN7SKP258-201ENST00000517151 304 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.3□□□□□ -2.2
VCX3BQ9H321 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
VCX3BQ9H321 MRPS36P5-201ENST00000551909 298 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 AL121821.2-201ENST00000556081 394 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.3□□□□□ -2.2
VCX3BQ9H321 AC090079.2-201ENST00000575289 768 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 MIR3162-201ENST00000581818 82 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.3□□□□□ -2.2
VCX3BQ9H321 AC112220.2-201ENST00000605513 533 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 AL158211.2-201ENST00000607282 395 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 AC084824.5-201ENST00000612009 413 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
VCX3BQ9H321 AC011939.3-201ENST00000613686 466 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.3□□□□□ -2.2
VCX3BQ9H321 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.3□□□□□ -2.2
VCX3BQ9H321 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.3□□□□□ -2.2
VCX3BQ9H321 RBBP8P1-201ENST00000449447 1844 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 AC104454.1-201ENST00000421341 1401 ntBASIC1.3□□□□□ -2.2
VCX3BQ9H321 SNORD115-3-201ENST00000363100 82 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 MIR491-201ENST00000384877 84 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 MIR518D-201ENST00000385014 87 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 RNU1-78P-201ENST00000391248 165 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 RPL21P24-201ENST00000413752 448 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 ISCA1P1-201ENST00000426679 387 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 AL451062.2-201ENST00000427515 271 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 USP9YP11-201ENST00000427537 717 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 AL354695.1-201ENST00000427935 228 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 TOMM22P2-201ENST00000430735 237 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 RPL7P34-201ENST00000433316 712 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 GTF2IP3-201ENST00000433887 494 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 CR769776.1-201ENST00000441254 787 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 MTCO2P25-201ENST00000447065 681 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.29□□□□□ -2.2
VCX3BQ9H321 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.29□□□□□ -2.2
VCX3BQ9H321 AC093809.1-201ENST00000509155 340 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.29□□□□□ -2.2
VCX3BQ9H321 RNU6-703P-201ENST00000516946 107 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 SNORA31.24-201ENST00000517232 57 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.29□□□□□ -2.2
VCX3BQ9H321 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.29□□□□□ -2.2
VCX3BQ9H321 AL133153.1-201ENST00000557756 303 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 MTND3P13-201ENST00000574391 343 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.29□□□□□ -2.2
VCX3BQ9H321 AC004987.4-201ENST00000603383 338 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 AF129408.1-201ENST00000608767 431 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 AL359314.1-201ENST00000616913 261 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.29□□□□□ -2.2
VCX3BQ9H321 AC110994.2-201ENST00000635481 492 ntBASIC1.29□□□□□ -2.2
VCX3BQ9H321 RNU6-661P-201ENST00000362409 107 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 RNU6-621P-201ENST00000364752 109 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 RNU6-203P-201ENST00000384038 104 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 AL021407.1-201ENST00000404531 386 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 AL359634.1-202ENST00000404721 284 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 MIR1284-201ENST00000408337 120 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 RNU2-36P-201ENST00000410361 191 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 RNU6-1140P-201ENST00000410517 106 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 RN7SKP223-201ENST00000410582 62 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.28□□□□□ -2.2
VCX3BQ9H321 AL513185.2-201ENST00000425543 193 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 GPM6BP2-201ENST00000432046 144 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 USP9YP35-201ENST00000435696 412 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 GPM6BP1-201ENST00000446387 144 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 ZNF886P-201ENST00000450781 723 ntBASIC1.28□□□□□ -2.2
VCX3BQ9H321 SSXP1-201ENST00000453640 473 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms