Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.58□□□□□ -1.84
VPS16Q9H269 AC107294.1-201ENST00000609524 467 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 AL133215.3-201ENST00000609801 448 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 AC130324.3-201ENST00000614165 542 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 AP001486.3-201ENST00000615334 372 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS16Q9H269 MTND4LP32-201ENST00000636111 270 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 MTND4P14-201ENST00000435799 1354 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 ZNF807-201ENST00000328088 1707 ntBASIC3.58□□□□□ -1.84
VPS16Q9H269 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VPS16Q9H269 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS16Q9H269 AC118273.1-201ENST00000525324 3006 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 AL161912.2-201ENST00000565707 3007 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
VPS16Q9H269 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS16Q9H269 Y_RNA.128-201ENST00000363391 112 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 Y_RNA.339-201ENST00000365325 102 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 SNORA4.3-201ENST00000365564 137 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 RNU6-190P-201ENST00000384154 102 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 MIR218-2-201ENST00000385006 110 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VPS16Q9H269 AL606923.1-201ENST00000406616 190 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 RNU2-33P-201ENST00000410344 192 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 RNA5SP229-201ENST00000410809 99 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS16Q9H269 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS16Q9H269 CALM2P2-201ENST00000428512 440 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 AC091286.1-201ENST00000431233 461 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS16Q9H269 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS16Q9H269 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS16Q9H269 RPS27P29-201ENST00000463110 252 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 CCDC34P1-201ENST00000507441 517 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS16Q9H269 AC005741.1-201ENST00000511094 432 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 AC010265.1-201ENST00000513509 211 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 Y_RNA.718-201ENST00000517110 102 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 SNORA25.17-201ENST00000517184 124 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS16Q9H269 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS16Q9H269 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS16Q9H269 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS16Q9H269 TRAV28-201ENST00000557548 323 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 AC007151.1-201ENST00000572774 483 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 MIR4703-201ENST00000577728 79 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS16Q9H269 BNIP3P25-201ENST00000596023 559 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS16Q9H269 AC040896.1-201ENST00000613819 479 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 uc_338.15-201ENST00000615470 191 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 AL359547.2-201ENST00000615810 418 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 AC034229.5-201ENST00000624258 185 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 AL359757.2-201ENST00000624309 274 ntBASIC3.57□□□□□ -1.84
VPS16Q9H269 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS16Q9H269 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
VPS16Q9H269 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS16Q9H269 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS16Q9H269 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS16Q9H269 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS16Q9H269 UBE2L2-201ENST00000254302 429 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 RNU6-1167P-201ENST00000363227 94 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 RNU6-288P-201ENST00000363690 104 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 Y_RNA.378-201ENST00000365652 113 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 MIR559-201ENST00000385188 96 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 RPL5P18-201ENST00000406671 891 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 RPS12P24-201ENST00000412619 387 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 RPS29P4-201ENST00000414733 161 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 RPL32P35-201ENST00000415214 394 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 Z82205.1-201ENST00000428456 297 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 AC007919.1-201ENST00000429380 217 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS16Q9H269 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS16Q9H269 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS16Q9H269 RPL23AP11-201ENST00000475260 469 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 AC027575.1-201ENST00000481064 460 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 AC083904.1-201ENST00000487828 231 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS16Q9H269 AC091885.1-201ENST00000506658 268 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 RNU6-559P-201ENST00000516151 98 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 RNU6-864P-201ENST00000516256 108 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 Y_RNA.689-201ENST00000516589 107 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 RNU6-1282P-201ENST00000516735 96 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 RNU6-1088P-201ENST00000516850 104 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 RNA5SP503-201ENST00000517047 117 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS16Q9H269 TRAV37-201ENST00000553906 342 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS16Q9H269 MIR4474-201ENST00000579189 78 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 AL022345.1-201ENST00000607292 135 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 AC009570.1-201ENST00000609599 745 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 AL390240.1-201ENST00000612950 384 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS16Q9H269 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.56□□□□□ -1.84
VPS16Q9H269 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS16Q9H269 TPTE2P4-201ENST00000258589 1605 ntBASIC3.55□□□□□ -1.84
VPS16Q9H269 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS16Q9H269 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
VPS16Q9H269 FAM35BP-202ENST00000497389 3337 ntBASIC3.55□□□□□ -1.84
VPS16Q9H269 SNORD115-7-201ENST00000365306 82 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms