Protein–RNA interactions for Protein: Q9H1Y3

OPN3, Opsin-3, humanhuman

Predicted RBP Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3Q9H1Y3 SNORA9.3-201ENST00000516383 129 ntBASIC2.34□□□□□ -2.03
OPN3Q9H1Y3 SNORA31.11-201ENST00000516528 139 ntBASIC2.34□□□□□ -2.03
OPN3Q9H1Y3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.34□□□□□ -2.03
OPN3Q9H1Y3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.34□□□□□ -2.03
OPN3Q9H1Y3 MIR4528-201ENST00000577763 90 ntBASIC2.34□□□□□ -2.03
OPN3Q9H1Y3 MIR4635-201ENST00000583759 79 ntBASIC2.34□□□□□ -2.03
OPN3Q9H1Y3 NRBF2P1-201ENST00000587407 859 ntBASIC2.34□□□□□ -2.03
OPN3Q9H1Y3 AL121992.2-201ENST00000606262 256 ntBASIC2.34□□□□□ -2.03
OPN3Q9H1Y3 MIR6817-201ENST00000615588 66 ntBASIC2.34□□□□□ -2.03
OPN3Q9H1Y3 AL449363.1-201ENST00000617815 186 ntBASIC2.34□□□□□ -2.03
OPN3Q9H1Y3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
OPN3Q9H1Y3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 RNA5SP68-201ENST00000363885 119 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 RN7SKP226-201ENST00000364912 300 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 RNU1-73P-201ENST00000383971 164 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 RNU2-49P-201ENST00000410666 184 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 MTND3P17-201ENST00000416968 344 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 MED13P1-201ENST00000428342 171 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 AC117522.1-201ENST00000509821 380 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 RNA5SP148-201ENST00000516527 94 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 RNU6-914P-201ENST00000516749 109 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 IGLV3-17-201ENST00000519099 244 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 AC090572.1-201ENST00000519251 160 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 AL359212.1-201ENST00000556608 614 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 MIR4298-201ENST00000584380 73 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 AC245014.2-201ENST00000603689 287 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 AC246785.4-201ENST00000605374 287 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 DUSP12P1-201ENST00000612874 516 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 MIR6895-201ENST00000613497 78 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 MIR203B-201ENST00000636080 86 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 U2.21-201ENST00000637295 81 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 MTND4P35-201ENST00000604257 1375 ntBASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.33□□□□□ -2.04
OPN3Q9H1Y3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AL139276.1-201ENST00000311910 1001 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 SNORD62.1-201ENST00000362541 86 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 Y_RNA.51-201ENST00000362725 102 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 RNU6-778P-201ENST00000363269 103 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 U3.12-201ENST00000364498 214 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 SNORA4.3-201ENST00000365564 137 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 SNORA24.1-201ENST00000384401 135 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 RNU6-658P-201ENST00000384606 106 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AC023141.4-201ENST00000412031 328 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AL139413.1-201ENST00000421309 217 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AL353729.1-201ENST00000425044 720 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AL358934.1-201ENST00000432346 324 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 MTATP6P16-201ENST00000434543 526 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 RPS15AP5-201ENST00000436276 388 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 CR769767.1-201ENST00000436337 346 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 MTND4P32-201ENST00000437189 1237 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 SRIP1-201ENST00000489235 288 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 MTND4P2-201ENST00000507767 1203 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 MTCO3P28-201ENST00000513351 515 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AC121758.2-201ENST00000553271 193 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AC027807.1-201ENST00000559921 996 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AC098848.2-201ENST00000588023 330 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AL355877.2-201ENST00000603670 358 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 Z84480.1-201ENST00000605131 311 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 MIR15A-201ENST00000607334 83 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 AC243829.7-201ENST00000633081 225 ntBASIC2.32□□□□□ -2.04
OPN3Q9H1Y3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
OPN3Q9H1Y3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
OPN3Q9H1Y3 AL355596.1-201ENST00000565399 3996 ntBASIC2.31□□□□□ -2.04
OPN3Q9H1Y3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
OPN3Q9H1Y3 RNA5SP126-201ENST00000365092 109 ntBASIC2.31□□□□□ -2.04
OPN3Q9H1Y3 RNU6-282P-201ENST00000365357 103 ntBASIC2.31□□□□□ -2.04
OPN3Q9H1Y3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
OPN3Q9H1Y3 RNU1-52P-201ENST00000384190 164 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms