Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RNU6-790P-201ENST00000384479 105 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 RNU6-306P-201ENST00000384617 107 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 SNORA75.4-201ENST00000391278 119 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 RNU6-1050P-201ENST00000410388 107 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AC097713.2-201ENST00000430199 356 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 NOTCH2P1-201ENST00000443481 624 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AL500522.2-201ENST00000448562 343 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 BTF3P15-201ENST00000455606 336 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 RNU7-187P-201ENST00000458985 68 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 RNU6-1037P-201ENST00000459571 107 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 TRMT10BP1-201ENST00000519377 943 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 HIGD1AP1-201ENST00000550979 275 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AMZ2P1-203ENST00000565833 850 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AL160281.1-201ENST00000605307 311 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AC124303.1-201ENST00000605703 360 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AL591424.2-201ENST00000617023 128 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 AC244517.12-201ENST00000623581 663 ntBASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC113Q9H0I3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 Y_RNA.151-201ENST00000363566 112 ntBASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 Y_RNA.187-201ENST00000363918 113 ntBASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 SNORD56-201ENST00000413522 71 ntBASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 Z99755.1-201ENST00000414048 380 ntBASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 AL354751.2-201ENST00000415471 210 ntBASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 AC099548.1-201ENST00000421443 426 ntBASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 AL139247.1-201ENST00000422768 325 ntBASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 RPS15AP10-201ENST00000432472 382 ntBASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 SNORA71B-202ENST00000439232 272 ntBASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 RPL26P9-201ENST00000457466 433 ntBASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 MIR2114-201ENST00000516645 80 ntBASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 RNU1-45P-201ENST00000517191 141 ntBASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 AC109479.2-201ENST00000517842 174 ntBASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 NACAP3-201ENST00000552100 481 ntBASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 AL121772.2-201ENST00000614331 297 ntBASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 OTUD4P1-201ENST00000237841 3067 ntBASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC113Q9H0I3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 FAM35DP-201ENST00000323387 2712 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 RNU6-778P-201ENST00000363269 103 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 Y_RNA.394-201ENST00000383942 103 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 MIR517A-201ENST00000385001 87 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AL030996.1-201ENST00000411430 235 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 NDUFS5P4-201ENST00000412983 318 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AF228730.4-201ENST00000421457 183 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AL591419.1-201ENST00000427423 339 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 snoU13.28-201ENST00000459235 104 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AL133162.1-201ENST00000463228 453 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 RPL23AP45-201ENST00000476406 468 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 RAC1P2-201ENST00000511164 579 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 Y_RNA.687-201ENST00000516558 91 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AL163153.1-201ENST00000554223 283 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AC090877.1-201ENST00000561418 344 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 CYP2C61P-201ENST00000604072 290 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AC018462.2-201ENST00000605375 395 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AL121917.1-203ENST00000605534 577 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AL669831.3-213ENST00000636676 183 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 U2.21-201ENST00000637295 81 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 SRP72P2-201ENST00000344851 1979 ntBASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC113Q9H0I3 AC007496.3-201ENST00000624987 3443 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms