Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC110792.1-201ENST00000491826 472 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 MTND1P19-201ENST00000511780 315 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 RNA5SP315-201ENST00000516340 116 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 RNU6-911P-201ENST00000516523 104 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 RNA5SP312-201ENST00000517068 116 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 AP003730.1-201ENST00000524605 285 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 HSPE1P20-201ENST00000538133 289 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 AC090517.1-201ENST00000569307 266 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 MIR5701-3-201ENST00000578890 82 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 MIR5701-1-201ENST00000585138 82 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 AP000787.2-201ENST00000604432 568 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 MIR5701-2-201ENST00000615634 82 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 AL159153.1-201ENST00000619688 317 ntBASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
FOXP3Q9BZS1 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
FOXP3Q9BZS1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 AL365440.1-201ENST00000436135 2167 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 Y_RNA.60-201ENST00000362831 98 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 RNU6-1167P-201ENST00000363227 94 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 RNU6-1317P-201ENST00000364582 104 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 RNU6-806P-201ENST00000365147 105 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 U3.15-201ENST00000365398 212 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 RNU1-64P-201ENST00000365443 163 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 RNU6-209P-201ENST00000384118 107 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 SNORA51.11-201ENST00000384442 131 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 MIR134-201ENST00000385258 73 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 SAR1AP2-201ENST00000392696 594 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 U3.42-201ENST00000408746 214 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 RNU7-169P-201ENST00000459456 61 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 AC133134.1-201ENST00000466800 359 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 RPL31P61-201ENST00000496160 376 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 AC146944.2-203ENST00000502493 354 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 AC139495.1-202ENST00000513164 354 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 SNORA40.15-201ENST00000516884 107 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 AC084851.1-201ENST00000529105 249 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 TRAV8-5-201ENST00000537369 341 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 AL161798.1-201ENST00000604630 131 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 MIR1244-1-201ENST00000612829 85 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 AC006065.5-201ENST00000623427 349 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 MIR1244-3-201ENST00000635744 85 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 MIR1244-2-201ENST00000636449 85 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 MIR1244-4-202ENST00000636813 85 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 ZNF299P-201ENST00000406845 1804 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 LINC02471-203ENST00000641941 4752 ntBASIC4.27□□□□□ -1.73
FOXP3Q9BZS1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 RNU6-384P-201ENST00000364900 104 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 RNU1-13P-201ENST00000384499 162 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 MIR514A1-201ENST00000385133 98 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 SNORA48.7-201ENST00000391302 135 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 AL022722.2-201ENST00000402519 180 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 MTCO3P19-201ENST00000415864 321 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 EIF4EP2-201ENST00000422816 654 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 AC139712.2-201ENST00000424302 339 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 AC079780.1-201ENST00000428259 207 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 RPL23AP52-201ENST00000439311 478 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 AC109329.1-201ENST00000518744 317 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 AC007375.1-201ENST00000554513 578 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 MIR5696-201ENST00000578474 85 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 AC002545.1-201ENST00000592511 181 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 FAM27D1-201ENST00000612308 341 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 RNA5SP196-201ENST00000625967 102 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 AL773545.4-201ENST00000637262 310 ntBASIC4.26□□□□□ -1.73
FOXP3Q9BZS1 AL513478.4-201ENST00000641636 310 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms