Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU6-272P-201ENST00000411028 104 ntBASIC0.91□□□□□ -2.26
SCAPERQ9BY12 AC096649.2-201ENST00000416186 393 ntBASIC0.91□□□□□ -2.26
SCAPERQ9BY12 RPS24P7-201ENST00000416921 246 ntBASIC0.91□□□□□ -2.26
SCAPERQ9BY12 AC007742.1-201ENST00000425789 329 ntBASIC0.91□□□□□ -2.26
SCAPERQ9BY12 AC245047.4-201ENST00000433189 144 ntBASIC0.91□□□□□ -2.26
SCAPERQ9BY12 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.91□□□□□ -2.26
SCAPERQ9BY12 ELOCP26-201ENST00000436067 329 ntBASIC0.91□□□□□ -2.26
SCAPERQ9BY12 RPS15AP5-201ENST00000436276 388 ntBASIC0.91□□□□□ -2.26
SCAPERQ9BY12 DYNLT3P2-201ENST00000442517 295 ntBASIC0.91□□□□□ -2.26
SCAPERQ9BY12 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.91□□□□□ -2.26
SCAPERQ9BY12 AC233702.2-202ENST00000562547 291 ntBASIC0.91□□□□□ -2.26
SCAPERQ9BY12 AC015688.2-201ENST00000584523 262 ntBASIC0.91□□□□□ -2.26
SCAPERQ9BY12 AC004775.1-201ENST00000607389 753 ntBASIC0.91□□□□□ -2.26
SCAPERQ9BY12 AC117490.2-201ENST00000610042 594 ntBASIC0.91□□□□□ -2.26
SCAPERQ9BY12 AL589743.7-201ENST00000612637 233 ntBASIC0.91□□□□□ -2.26
SCAPERQ9BY12 AC022202.1-201ENST00000613515 211 ntBASIC0.91□□□□□ -2.26
SCAPERQ9BY12 AL109659.3-201ENST00000624985 950 ntBASIC0.91□□□□□ -2.26
SCAPERQ9BY12 MIR518A2-201ENST00000384966 87 ntBASIC0.9□□□□□ -2.26
SCAPERQ9BY12 RNU2-49P-201ENST00000410666 184 ntBASIC0.9□□□□□ -2.26
SCAPERQ9BY12 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.9□□□□□ -2.26
SCAPERQ9BY12 SUMO1P1-201ENST00000497904 306 ntBASIC0.9□□□□□ -2.26
SCAPERQ9BY12 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
SCAPERQ9BY12 DUXAP11-201ENST00000603858 526 ntBASIC0.9□□□□□ -2.26
SCAPERQ9BY12 AC018638.7-201ENST00000605836 1114 ntBASIC0.9□□□□□ -2.26
SCAPERQ9BY12 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.9□□□□□ -2.26
SCAPERQ9BY12 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
SCAPERQ9BY12 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
SCAPERQ9BY12 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.89□□□□□ -2.27
SCAPERQ9BY12 MIR30A-201ENST00000385092 71 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 RN7SKP200-201ENST00000410564 320 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 RPL37P10-201ENST00000412884 288 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 AC092634.2-201ENST00000428146 1010 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 MTND5P15-201ENST00000434246 349 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.89□□□□□ -2.27
SCAPERQ9BY12 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.89□□□□□ -2.27
SCAPERQ9BY12 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.89□□□□□ -2.27
SCAPERQ9BY12 AL138963.2-201ENST00000605137 226 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 OR4G3P-201ENST00000633500 913 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 U6.107-201ENST00000637108 79 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 MTND5P30-201ENST00000452896 1731 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 AC005832.2-201ENST00000538921 1430 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 RNU6-444P-201ENST00000383988 108 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 RNA5SP511-201ENST00000410487 115 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 NDUFB4P7-201ENST00000423198 363 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.89□□□□□ -2.27
SCAPERQ9BY12 AK3P2-201ENST00000507976 429 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 RNU6-229P-201ENST00000516614 102 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.89□□□□□ -2.27
SCAPERQ9BY12 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.89□□□□□ -2.27
SCAPERQ9BY12 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.89□□□□□ -2.27
SCAPERQ9BY12 Z99571.1-201ENST00000636677 394 ntBASIC0.89□□□□□ -2.27
SCAPERQ9BY12 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
SCAPERQ9BY12 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
SCAPERQ9BY12 MIR649-201ENST00000384843 97 ntBASIC0.88□□□□□ -2.27
SCAPERQ9BY12 RNA5SP127-201ENST00000411051 133 ntBASIC0.88□□□□□ -2.27
SCAPERQ9BY12 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.88□□□□□ -2.27
SCAPERQ9BY12 EIF4EP2-201ENST00000422816 654 ntBASIC0.88□□□□□ -2.27
SCAPERQ9BY12 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.88□□□□□ -2.27
SCAPERQ9BY12 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.88□□□□□ -2.27
SCAPERQ9BY12 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.88□□□□□ -2.27
SCAPERQ9BY12 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.88□□□□□ -2.27
SCAPERQ9BY12 AC099513.1-201ENST00000490423 301 ntBASIC0.88□□□□□ -2.27
SCAPERQ9BY12 RNU6-27P-201ENST00000516146 107 ntBASIC0.88□□□□□ -2.27
SCAPERQ9BY12 AP003355.1-201ENST00000518956 587 ntBASIC0.88□□□□□ -2.27
SCAPERQ9BY12 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.88□□□□□ -2.27
SCAPERQ9BY12 CYCSP23-201ENST00000519781 313 ntBASIC0.88□□□□□ -2.27
SCAPERQ9BY12 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.88□□□□□ -2.27
SCAPERQ9BY12 OR5B19P-201ENST00000531766 928 ntBASIC0.88□□□□□ -2.27
SCAPERQ9BY12 OR8K4P-201ENST00000534608 872 ntBASIC0.88□□□□□ -2.27
SCAPERQ9BY12 AP003973.1-201ENST00000604639 691 ntBASIC0.88□□□□□ -2.27
SCAPERQ9BY12 AC080013.4-201ENST00000607624 649 ntBASIC0.88□□□□□ -2.27
SCAPERQ9BY12 AC007349.4-201ENST00000608114 532 ntBASIC0.88□□□□□ -2.27
SCAPERQ9BY12 AL121652.1-201ENST00000608851 448 ntBASIC0.88□□□□□ -2.27
SCAPERQ9BY12 AC006213.4-201ENST00000616184 634 ntBASIC0.88□□□□□ -2.27
SCAPERQ9BY12 MIR424-201ENST00000362227 98 ntBASIC0.87□□□□□ -2.27
SCAPERQ9BY12 RNU2-63P-201ENST00000410792 194 ntBASIC0.87□□□□□ -2.27
SCAPERQ9BY12 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.87□□□□□ -2.27
SCAPERQ9BY12 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.87□□□□□ -2.27
SCAPERQ9BY12 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.87□□□□□ -2.27
SCAPERQ9BY12 HMGN3P1-201ENST00000453847 193 ntBASIC0.87□□□□□ -2.27
SCAPERQ9BY12 AP1S2P1-201ENST00000457344 379 ntBASIC0.87□□□□□ -2.27
SCAPERQ9BY12 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.87□□□□□ -2.27
SCAPERQ9BY12 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SCAPERQ9BY12 RNA5SP112-201ENST00000515937 99 ntBASIC0.87□□□□□ -2.27
SCAPERQ9BY12 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.87□□□□□ -2.27
SCAPERQ9BY12 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.87□□□□□ -2.27
SCAPERQ9BY12 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC0.87□□□□□ -2.27
SCAPERQ9BY12 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.87□□□□□ -2.27
SCAPERQ9BY12 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
SCAPERQ9BY12 RNU6-222P-201ENST00000362438 107 ntBASIC0.86□□□□□ -2.27
SCAPERQ9BY12 RNU6-1151P-201ENST00000384684 107 ntBASIC0.86□□□□□ -2.27
SCAPERQ9BY12 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.86□□□□□ -2.27
SCAPERQ9BY12 RAB11AP1-201ENST00000442978 646 ntBASIC0.86□□□□□ -2.27
SCAPERQ9BY12 AC004817.2-201ENST00000561794 651 ntBASIC0.86□□□□□ -2.27
SCAPERQ9BY12 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.86□□□□□ -2.27
SCAPERQ9BY12 AC007151.1-201ENST00000572774 483 ntBASIC0.86□□□□□ -2.27
SCAPERQ9BY12 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.86□□□□□ -2.27
SCAPERQ9BY12 AP005212.4-201ENST00000614206 710 ntBASIC0.86□□□□□ -2.27
SCAPERQ9BY12 AC024581.2-201ENST00000619986 252 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms