Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 NF1P5-201ENST00000588287 448 ntBASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 AC005296.1-201ENST00000616145 209 ntBASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 AL451142.2-201ENST00000429076 2090 ntBASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 AC092079.1-201ENST00000558620 1985 ntBASIC4.82□□□□□ -1.64
COL25A1Q9BXS0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 UBE2L2-201ENST00000254302 429 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 RNA5SP72-201ENST00000364442 117 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 SNORD14B-201ENST00000364533 90 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 RNU6-281P-201ENST00000384212 103 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 MIR329-1-201ENST00000385028 80 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 MIR153-2-201ENST00000385225 87 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 MIR589-201ENST00000385238 99 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 SNORA12.1-201ENST00000390873 148 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 ENSAP1-201ENST00000392855 326 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 RPL21P67-201ENST00000402896 478 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 AL357515.1-201ENST00000402967 542 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 RNY4P30-201ENST00000410216 95 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 RN7SKP164-201ENST00000516138 266 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 RNU1-6P-201ENST00000516290 144 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 RNU6-966P-201ENST00000516479 104 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 RNU6-638P-201ENST00000516582 104 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 RNU2-56P-201ENST00000516826 190 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 RNA5SP165-201ENST00000517142 115 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 RN7SL600P-201ENST00000581811 299 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 MIR3914-2-201ENST00000637339 95 ntBASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL25A1Q9BXS0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 RNU6-1145P-201ENST00000384246 107 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 MIR659-201ENST00000384963 97 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 BTF3L4P2-201ENST00000392798 346 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 RNU6-1001P-201ENST00000411265 100 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 NDUFB4P7-201ENST00000423198 363 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 AIMP1P2-201ENST00000425294 312 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 Y_RNA.637-201ENST00000459424 114 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 AL121594.1-201ENST00000475906 575 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 RPL23AP49-201ENST00000492925 468 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 RPL31P61-201ENST00000496160 376 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 HIGD1AP3-201ENST00000515857 278 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 RNU6-840P-201ENST00000517275 65 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 AL355812.1-201ENST00000603215 216 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 AL022401.1-201ENST00000619498 108 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 AL360181.4-201ENST00000621752 134 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 U3.53-201ENST00000628922 216 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 AC068647.2-201ENST00000637380 353 ntBASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL25A1Q9BXS0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 AP005435.3-201ENST00000531260 3198 ntBASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL25A1Q9BXS0 RNU6-103P-201ENST00000363686 107 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms