Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 Y_RNA.193-201ENST00000363979 102 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 RNU6-505P-201ENST00000384427 107 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 RNU2-33P-201ENST00000410344 192 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 RN7SKP177-201ENST00000410567 355 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 RNU6-55P-201ENST00000411092 107 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 AC096644.2-201ENST00000429278 159 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.68□□□□□ -1.82
NDC1Q9BTX1 AL500522.2-201ENST00000448562 343 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 FABP5P15-201ENST00000453566 214 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 snoU13.22-201ENST00000459428 104 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.68□□□□□ -1.82
NDC1Q9BTX1 AC018437.1-201ENST00000492214 406 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 AC022493.1-201ENST00000492984 337 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.68□□□□□ -1.82
NDC1Q9BTX1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NDC1Q9BTX1 AC084851.1-201ENST00000529105 249 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.68□□□□□ -1.82
NDC1Q9BTX1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.68□□□□□ -1.82
NDC1Q9BTX1 AC005899.2-201ENST00000584353 90 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.68□□□□□ -1.82
NDC1Q9BTX1 AC104695.3-201ENST00000604052 296 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 MIR486-1-201ENST00000612171 68 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 AC005183.1-201ENST00000603687 1979 ntBASIC3.68□□□□□ -1.82
NDC1Q9BTX1 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NDC1Q9BTX1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NDC1Q9BTX1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NDC1Q9BTX1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.68□□□□□ -1.82
NDC1Q9BTX1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.68□□□□□ -1.82
NDC1Q9BTX1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.67□□□□□ -1.82
NDC1Q9BTX1 Y_RNA.80-201ENST00000362996 102 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 RNA5SP322-201ENST00000363617 119 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NDC1Q9BTX1 SNORA41-201ENST00000384675 132 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 Y_RNA.645-201ENST00000391229 102 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.67□□□□□ -1.82
NDC1Q9BTX1 RNU6-1025P-201ENST00000410629 104 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 AC096664.2-201ENST00000411843 406 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 RAC1P3-201ENST00000416129 580 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 SYF2P2-201ENST00000417620 583 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 AL139247.1-201ENST00000422768 325 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 UBE2D3P2-201ENST00000424409 445 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.67□□□□□ -1.82
NDC1Q9BTX1 PIGFP3-201ENST00000441918 722 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.67□□□□□ -1.82
NDC1Q9BTX1 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.67□□□□□ -1.82
NDC1Q9BTX1 AC009237.8-201ENST00000445492 379 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.67□□□□□ -1.82
NDC1Q9BTX1 RNU6-307P-201ENST00000516743 106 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 RNU6-264P-201ENST00000517134 104 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.67□□□□□ -1.82
NDC1Q9BTX1 AP004242.1-201ENST00000533701 349 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.67□□□□□ -1.82
NDC1Q9BTX1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.67□□□□□ -1.82
NDC1Q9BTX1 OR1M4P-201ENST00000589199 287 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 VN1R107P-201ENST00000601784 209 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 AC092447.9-201ENST00000603395 144 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.67□□□□□ -1.82
NDC1Q9BTX1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
NDC1Q9BTX1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NDC1Q9BTX1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.67□□□□□ -1.82
NDC1Q9BTX1 AC116096.1-201ENST00000566804 2314 ntBASIC3.67□□□□□ -1.82
NDC1Q9BTX1 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NDC1Q9BTX1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.66□□□□□ -1.82
NDC1Q9BTX1 AC005592.1-201ENST00000566527 1640 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NDC1Q9BTX1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.66□□□□□ -1.82
NDC1Q9BTX1 RNU6-50P-201ENST00000362356 103 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 Y_RNA.324-201ENST00000365165 102 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 RNU1-115P-201ENST00000365329 160 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 RNU6-26P-201ENST00000383985 107 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 Y_RNA.455-201ENST00000384230 98 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 AL445529.1-201ENST00000398713 389 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 RNU2-71P-201ENST00000411395 189 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.66□□□□□ -1.82
NDC1Q9BTX1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.66□□□□□ -1.82
NDC1Q9BTX1 AL591419.1-201ENST00000427423 339 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 HMGB1P12-201ENST00000438594 598 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.66□□□□□ -1.82
NDC1Q9BTX1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.66□□□□□ -1.82
NDC1Q9BTX1 PCMTD1P1-201ENST00000455560 355 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 KC877373.1-201ENST00000479066 408 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 AC116655.1-201ENST00000508324 901 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 RNU1-86P-201ENST00000516108 154 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 MIR892C-201ENST00000516410 77 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 RNU1-107P-201ENST00000516617 154 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 AC022695.1-201ENST00000522089 237 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 AC090281.1-201ENST00000523019 276 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.66□□□□□ -1.82
NDC1Q9BTX1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.66□□□□□ -1.82
NDC1Q9BTX1 TRAV37-201ENST00000553906 342 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 AC110588.1-201ENST00000559699 137 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.66□□□□□ -1.82
NDC1Q9BTX1 AC109446.1-201ENST00000566172 220 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.66□□□□□ -1.82
NDC1Q9BTX1 AC113195.1-201ENST00000579952 141 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 MIR3944-201ENST00000581277 108 ntBASIC3.66□□□□□ -1.82
NDC1Q9BTX1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms