Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCM2Q9BSQ5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.56□□□□□ -2
CCM2Q9BSQ5 NACAP2-201ENST00000318548 624 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 RNU6-181P-201ENST00000363225 107 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CCM2Q9BSQ5 MIR592-201ENST00000384959 97 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 CISD1P1-201ENST00000393907 327 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 DEFB108C-201ENST00000400154 252 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 RNU6-193P-201ENST00000410977 107 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC023141.4-201ENST00000412031 328 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.56□□□□□ -2
CCM2Q9BSQ5 BTF3L4P1-201ENST00000413813 468 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.56□□□□□ -2
CCM2Q9BSQ5 HMGB1P9-201ENST00000429856 646 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AL591704.1-201ENST00000432574 275 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.56□□□□□ -2
CCM2Q9BSQ5 RPS15AP27-201ENST00000449183 343 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC108938.1-201ENST00000451204 136 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.56□□□□□ -2
CCM2Q9BSQ5 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC109927.2-201ENST00000506416 303 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 RBBP4P6-201ENST00000508098 202 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 RNU6-445P-201ENST00000516949 107 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC025755.1-201ENST00000521306 278 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.56□□□□□ -2
CCM2Q9BSQ5 AP003122.3-201ENST00000526316 255 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AP001646.1-201ENST00000527936 915 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC084851.1-201ENST00000529105 249 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC004486.1-201ENST00000546846 233 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.56□□□□□ -2
CCM2Q9BSQ5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.56□□□□□ -2
CCM2Q9BSQ5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC024619.4-201ENST00000580924 316 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 MIR3162-201ENST00000581818 82 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AL670379.4-201ENST00000605279 254 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC126118.1-201ENST00000607744 628 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC005332.10-201ENST00000612725 619 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC009509.4-201ENST00000619202 509 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC024940.5-201ENST00000622889 474 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AL157786.1-207ENST00000627771 695 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 AC093536.2-201ENST00000565257 1406 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCM2Q9BSQ5 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 ADAM3A-203ENST00000461344 2157 ntBASIC2.56□□□□□ -2
CCM2Q9BSQ5 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CCM2Q9BSQ5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.55□□□□□ -2
CCM2Q9BSQ5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.55□□□□□ -2
CCM2Q9BSQ5 SNORD62.1-201ENST00000362541 86 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 RNU6-1097P-201ENST00000363586 107 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 RNU6-61P-201ENST00000365528 109 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 MIR1-2-201ENST00000384961 85 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 RNU6-1025P-201ENST00000410629 104 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 RPL7P37-201ENST00000425095 738 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 AC007560.1-201ENST00000426912 237 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.55□□□□□ -2
CCM2Q9BSQ5 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.55□□□□□ -2
CCM2Q9BSQ5 MTND1P29-201ENST00000448112 647 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 C1DP4-201ENST00000455429 424 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 AL122001.1-201ENST00000457027 370 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.55□□□□□ -2
CCM2Q9BSQ5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.55□□□□□ -2
CCM2Q9BSQ5 RNU6-1315P-201ENST00000517187 99 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 RNU1-104P-201ENST00000517280 175 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 MTCO2P4-201ENST00000517968 247 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 AC090136.1-201ENST00000520009 240 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.55□□□□□ -2
CCM2Q9BSQ5 SUB1P1-201ENST00000524415 382 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 OR5AL2P-201ENST00000532185 920 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.55□□□□□ -2
CCM2Q9BSQ5 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.55□□□□□ -2
CCM2Q9BSQ5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.55□□□□□ -2
CCM2Q9BSQ5 AC110491.1-201ENST00000562191 2010 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.55□□□□□ -2
CCM2Q9BSQ5 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.55□□□□□ -2
CCM2Q9BSQ5 AC004908.3-201ENST00000610248 625 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 AL589743.7-201ENST00000612637 233 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 AC099842.1-201ENST00000619919 596 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 AC093648.1-201ENST00000623546 606 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.55□□□□□ -2
CCM2Q9BSQ5 U6.114-201ENST00000636407 96 ntBASIC2.55□□□□□ -2
CCM2Q9BSQ5 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.55□□□□□ -2
CCM2Q9BSQ5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CCM2Q9BSQ5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCM2Q9BSQ5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CCM2Q9BSQ5 CKAP2P1-201ENST00000555477 2049 ntBASIC2.54□□□□□ -2
CCM2Q9BSQ5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
CCM2Q9BSQ5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCM2Q9BSQ5 ELF2P3-201ENST00000445099 1506 ntBASIC2.54□□□□□ -2
CCM2Q9BSQ5 Y_RNA.367-201ENST00000365544 101 ntBASIC2.54□□□□□ -2
CCM2Q9BSQ5 RNU6-108P-201ENST00000365558 107 ntBASIC2.54□□□□□ -2
CCM2Q9BSQ5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.54□□□□□ -2
CCM2Q9BSQ5 RNU6-1042P-201ENST00000384204 107 ntBASIC2.54□□□□□ -2
CCM2Q9BSQ5 RNA5SP210-201ENST00000391034 120 ntBASIC2.54□□□□□ -2
CCM2Q9BSQ5 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.54□□□□□ -2
CCM2Q9BSQ5 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.54□□□□□ -2
CCM2Q9BSQ5 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms