Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 DDX3P2-201ENST00000446138 111 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 PAXBP1P1-201ENST00000449315 447 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.97□□□□□ -2.09
CDX2Q99626 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.97□□□□□ -2.09
CDX2Q99626 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.97□□□□□ -2.09
CDX2Q99626 HSPE1P23-201ENST00000509838 286 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
CDX2Q99626 RNU6-927P-201ENST00000516199 100 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 SNORA31.18-201ENST00000517043 134 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 RNU6-840P-201ENST00000517275 65 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 ARL2BPP2-201ENST00000550907 489 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.97□□□□□ -2.09
CDX2Q99626 AC009127.3-201ENST00000570531 403 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CDX2Q99626 AC093783.1-201ENST00000612976 329 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 AC022709.1-201ENST00000615967 87 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 MIR6515-201ENST00000619843 57 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 AC017037.3-201ENST00000625016 472 ntBASIC1.97□□□□□ -2.09
CDX2Q99626 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.97□□□□□ -2.09
CDX2Q99626 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CDX2Q99626 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.97□□□□□ -2.09
CDX2Q99626 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CDX2Q99626 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CDX2Q99626 Y_RNA.36-201ENST00000362602 112 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.96□□□□□ -2.1
CDX2Q99626 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.96□□□□□ -2.1
CDX2Q99626 UBE2FP1-201ENST00000416536 447 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.96□□□□□ -2.1
CDX2Q99626 XKRYP1-201ENST00000423438 492 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 XKRYP2-201ENST00000432915 492 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.96□□□□□ -2.1
CDX2Q99626 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.96□□□□□ -2.1
CDX2Q99626 AC005094.1-201ENST00000440420 368 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 COX6CP12-201ENST00000446748 202 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.96□□□□□ -2.1
CDX2Q99626 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.96□□□□□ -2.1
CDX2Q99626 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.96□□□□□ -2.1
CDX2Q99626 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.96□□□□□ -2.1
CDX2Q99626 AC013267.1-201ENST00000458227 267 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.96□□□□□ -2.1
CDX2Q99626 MRPS17P3-201ENST00000465453 385 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 AC004263.1-201ENST00000479327 332 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 RPS15AP36-201ENST00000492022 382 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 RPS29P11-201ENST00000496507 171 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 AC008526.1-201ENST00000509149 338 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.96□□□□□ -2.1
CDX2Q99626 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.96□□□□□ -2.1
CDX2Q99626 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.96□□□□□ -2.1
CDX2Q99626 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.96□□□□□ -2.1
CDX2Q99626 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.96□□□□□ -2.1
CDX2Q99626 MIR4293-201ENST00000584305 78 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 AC008751.2-201ENST00000597885 980 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 VN1R82P-201ENST00000601481 356 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 AL158042.1-201ENST00000605338 460 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 MIR502-201ENST00000606349 86 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 RNU6-88P-201ENST00000606801 100 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 AC007349.4-201ENST00000608114 532 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 AC239868.4-201ENST00000608318 671 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 AC004908.3-201ENST00000610248 625 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.96□□□□□ -2.1
CDX2Q99626 AC013470.4-201ENST00000619978 986 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 PVT1_3.1-201ENST00000620853 95 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 AC068787.1-201ENST00000623908 691 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 MIR203B-201ENST00000636080 86 ntBASIC1.96□□□□□ -2.1
CDX2Q99626 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CDX2Q99626 ZNF876P-202ENST00000398732 1485 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CDX2Q99626 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDX2Q99626 Y_RNA.295-201ENST00000364918 102 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 Z98749.2-208ENST00000381646 500 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 RNU6-723P-201ENST00000383973 107 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 AL359634.1-202ENST00000404721 284 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 MIR1294-201ENST00000408503 142 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 AL359704.1-201ENST00000411586 781 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.95□□□□□ -2.1
CDX2Q99626 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.95□□□□□ -2.1
CDX2Q99626 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.95□□□□□ -2.1
CDX2Q99626 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.95□□□□□ -2.1
CDX2Q99626 SKA2P1-201ENST00000425592 390 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 AC007919.1-201ENST00000429380 217 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.95□□□□□ -2.1
CDX2Q99626 PGBD4P3-201ENST00000440731 581 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 USP9YP8-201ENST00000441913 500 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 RPS15AP27-201ENST00000449183 343 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.95□□□□□ -2.1
CDX2Q99626 AC010631.1-201ENST00000474150 156 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 NDUFB4P2-201ENST00000509515 391 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 AC093281.2-201ENST00000510153 597 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 MRPS36P2-201ENST00000512569 299 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.95□□□□□ -2.1
CDX2Q99626 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CDX2Q99626 MTCYBP43-201ENST00000513621 740 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 SNORA31.3-201ENST00000516029 96 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.95□□□□□ -2.1
CDX2Q99626 MTND4P33-201ENST00000556706 766 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.95□□□□□ -2.1
CDX2Q99626 AC097468.3-201ENST00000607956 456 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 AC013562.2-201ENST00000611632 603 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 AL139418.1-201ENST00000613613 177 ntBASIC1.95□□□□□ -2.1
CDX2Q99626 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms