Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RPRD1AQ96P16 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.18□□□□□ -2.06
RPRD1AQ96P16 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.18□□□□□ -2.06
RPRD1AQ96P16 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.18□□□□□ -2.06
RPRD1AQ96P16 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.17□□□□□ -2.06
RPRD1AQ96P16 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.17□□□□□ -2.06
RPRD1AQ96P16 RNU6-486P-201ENST00000363116 107 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 RNY4P16-201ENST00000364768 94 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 RNU4-52P-201ENST00000384209 138 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 Y_RNA.534-201ENST00000384599 112 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.17□□□□□ -2.06
RPRD1AQ96P16 RPS3AP44-201ENST00000425466 790 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 HMGB3P12-201ENST00000438745 556 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 GPM6BP3-201ENST00000442797 145 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.17□□□□□ -2.06
RPRD1AQ96P16 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.17□□□□□ -2.06
RPRD1AQ96P16 SNORD97-201ENST00000459187 142 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 AC109486.1-201ENST00000486833 374 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 AC116347.2-201ENST00000514912 523 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 SNORA25.11-201ENST00000515935 105 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 RNA5SP112-201ENST00000515937 99 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 RNU6-572P-201ENST00000516724 80 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 RNU6-143P-201ENST00000516942 93 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 AL354943.1-201ENST00000572103 781 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.17□□□□□ -2.06
RPRD1AQ96P16 TUSC7.1-201ENST00000610969 165 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
RPRD1AQ96P16 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.17□□□□□ -2.06
RPRD1AQ96P16 MIR219B-201ENST00000637023 88 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.17□□□□□ -2.06
RPRD1AQ96P16 KPNA2P1-201ENST00000458289 1591 ntBASIC2.17□□□□□ -2.06
RPRD1AQ96P16 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.17□□□□□ -2.06
RPRD1AQ96P16 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.16□□□□□ -2.06
RPRD1AQ96P16 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
RPRD1AQ96P16 RNU6-809P-201ENST00000384461 107 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 RNU2-40P-201ENST00000410833 196 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 RNU2-62P-201ENST00000410868 191 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AL356379.1-201ENST00000414105 126 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 EIF4EP4-201ENST00000424916 578 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AC124916.1-201ENST00000444020 547 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AL606662.1-201ENST00000445763 553 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 RNU6-953P-201ENST00000459154 107 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AC072039.1-201ENST00000477611 581 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AC104435.1-201ENST00000483483 166 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AC011005.2-201ENST00000487324 359 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AC068781.1-201ENST00000488231 618 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AC022493.1-201ENST00000492984 337 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AC008526.1-201ENST00000509149 338 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 SMURF2P1-201ENST00000514992 481 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 RNU7-193P-201ENST00000516723 65 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.16□□□□□ -2.06
RPRD1AQ96P16 OR5AQ1P-201ENST00000527596 927 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AL133241.1-201ENST00000556832 487 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 MIR4782-201ENST00000577987 79 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 MTCYBP22-201ENST00000603788 447 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AP000811.1-201ENST00000603803 651 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AC116312.1-201ENST00000606841 314 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AL365204.3-201ENST00000612448 685 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AC006338.1-201ENST00000618453 749 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 AP002782.1-201ENST00000623107 614 ntBASIC2.16□□□□□ -2.06
RPRD1AQ96P16 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RPRD1AQ96P16 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.06
RPRD1AQ96P16 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
RPRD1AQ96P16 RNU5E-6P-201ENST00000365574 115 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 RNU6-898P-201ENST00000365627 104 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 RNU6-748P-201ENST00000384648 107 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AC092809.3-201ENST00000415453 231 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.15□□□□□ -2.07
RPRD1AQ96P16 RPS27AP14-201ENST00000422868 454 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AL591212.2-201ENST00000433923 257 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AL354941.1-201ENST00000438600 464 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AL513124.1-201ENST00000450410 614 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.15□□□□□ -2.07
RPRD1AQ96P16 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AC116655.1-201ENST00000508324 901 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 RNU6-1092P-201ENST00000516955 87 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 ACA59.2-201ENST00000517061 156 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 SNORA31.19-201ENST00000517079 126 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AC022616.6-201ENST00000520479 119 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 MTND2P32-201ENST00000521584 1038 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AC078899.2-201ENST00000595282 212 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AP001981.2-201ENST00000603241 418 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AC144521.1-201ENST00000607148 956 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AC022893.3-201ENST00000607665 437 ntBASIC2.15□□□□□ -2.07
RPRD1AQ96P16 AC130324.3-201ENST00000614165 542 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms