Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 MTND5P2-201ENST00000442927 1142 ntBASIC2.52□□□□□ -2.01
CCDC7Q96M83 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC7Q96M83 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC7Q96M83 AC105252.1-201ENST00000503089 286 ntBASIC2.52□□□□□ -2.01
CCDC7Q96M83 RPF2P2-201ENST00000504693 896 ntBASIC2.52□□□□□ -2.01
CCDC7Q96M83 RNA5SP471-201ENST00000516971 106 ntBASIC2.52□□□□□ -2.01
CCDC7Q96M83 AC022634.1-201ENST00000520765 532 ntBASIC2.52□□□□□ -2.01
CCDC7Q96M83 MTND4LP18-201ENST00000526864 291 ntBASIC2.52□□□□□ -2.01
CCDC7Q96M83 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC7Q96M83 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC7Q96M83 AC012435.1-202ENST00000568772 240 ntBASIC2.52□□□□□ -2.01
CCDC7Q96M83 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC7Q96M83 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC7Q96M83 MIR3146-201ENST00000580367 79 ntBASIC2.52□□□□□ -2.01
CCDC7Q96M83 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC7Q96M83 AC084768.2-201ENST00000622736 221 ntBASIC2.52□□□□□ -2.01
CCDC7Q96M83 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC7Q96M83 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC7Q96M83 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CCDC7Q96M83 UBE2L2-201ENST00000254302 429 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 RNU6-501P-201ENST00000364072 100 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 SNORD56.5-201ENST00000364281 72 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 RNU6-512P-201ENST00000364438 103 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 SNORD48-201ENST00000364953 64 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 RNY3P13-201ENST00000365542 102 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 RNU6-701P-201ENST00000384059 107 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 U8.10-201ENST00000384260 133 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 AL627390.1-201ENST00000396055 340 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 FGF7P8-201ENST00000402994 292 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 AL139397.2-201ENST00000404529 772 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 NDUFS5P1-201ENST00000405668 289 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 BX682237.1-201ENST00000415016 335 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC7Q96M83 AC104651.1-201ENST00000427559 735 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC7Q96M83 HMGB1P27-201ENST00000431429 603 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 RPS15AP5-201ENST00000436276 388 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC7Q96M83 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC7Q96M83 AC132942.1-201ENST00000486753 483 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 AF131216.2-201ENST00000512316 564 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC7Q96M83 RNA5SP165-201ENST00000517142 115 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.51□□□□□ -2.01
CCDC7Q96M83 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC7Q96M83 SUB1P1-201ENST00000524415 382 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC7Q96M83 AC009094.1-201ENST00000564443 426 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 PCMTD1P2-201ENST00000565017 355 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 MIR5194-201ENST00000582634 120 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC7Q96M83 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC7Q96M83 AL161798.1-201ENST00000604630 131 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 AC108747.1-201ENST00000609508 535 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 AC017037.3-201ENST00000625016 472 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC7Q96M83 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC7Q96M83 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
CCDC7Q96M83 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CCDC7Q96M83 KPNA2P1-201ENST00000458289 1591 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC7Q96M83 CR848007.1-201ENST00000442354 1699 ntBASIC2.51□□□□□ -2.01
CCDC7Q96M83 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC7Q96M83 RNU6-661P-201ENST00000362409 107 ntBASIC2.5□□□□□ -2.01
CCDC7Q96M83 RNU6-1180P-201ENST00000364935 107 ntBASIC2.5□□□□□ -2.01
CCDC7Q96M83 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CCDC7Q96M83 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC7Q96M83 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CCDC7Q96M83 RNU2-49P-201ENST00000410666 184 ntBASIC2.5□□□□□ -2.01
CCDC7Q96M83 RNA5SP270-201ENST00000411361 118 ntBASIC2.5□□□□□ -2.01
CCDC7Q96M83 GPM6BP2-201ENST00000432046 144 ntBASIC2.5□□□□□ -2.01
CCDC7Q96M83 AC118469.1-201ENST00000442943 488 ntBASIC2.5□□□□□ -2.01
CCDC7Q96M83 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC7Q96M83 GPM6BP1-201ENST00000446387 144 ntBASIC2.5□□□□□ -2.01
CCDC7Q96M83 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC7Q96M83 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.5□□□□□ -2.01
CCDC7Q96M83 AC107393.1-201ENST00000512403 346 ntBASIC2.5□□□□□ -2.01
CCDC7Q96M83 SNORA25.15-201ENST00000516487 89 ntBASIC2.5□□□□□ -2.01
CCDC7Q96M83 RNU6-201P-201ENST00000517100 61 ntBASIC2.5□□□□□ -2.01
CCDC7Q96M83 AC026241.1-201ENST00000517873 2142 ntBASIC2.5□□□□□ -2.01
CCDC7Q96M83 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC7Q96M83 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC7Q96M83 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC7Q96M83 MTCYBP22-201ENST00000603788 447 ntBASIC2.5□□□□□ -2.01
CCDC7Q96M83 AC034229.4-201ENST00000607861 441 ntBASIC2.5□□□□□ -2.01
CCDC7Q96M83 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CCDC7Q96M83 AC091953.2-201ENST00000623979 160 ntBASIC2.5□□□□□ -2.01
CCDC7Q96M83 AC006927.3-201ENST00000638789 384 ntBASIC2.5□□□□□ -2.01
CCDC7Q96M83 AL445523.1-201ENST00000451184 1362 ntBASIC2.5□□□□□ -2.01
CCDC7Q96M83 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CCDC7Q96M83 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CCDC7Q96M83 RNU6-500P-201ENST00000362349 107 ntBASIC2.49□□□□□ -2.01
CCDC7Q96M83 FO393413.1-201ENST00000402892 195 ntBASIC2.49□□□□□ -2.01
CCDC7Q96M83 RNU2-62P-201ENST00000410868 191 ntBASIC2.49□□□□□ -2.01
CCDC7Q96M83 RNU2-68P-201ENST00000410878 191 ntBASIC2.49□□□□□ -2.01
CCDC7Q96M83 AC023141.4-201ENST00000412031 328 ntBASIC2.49□□□□□ -2.01
CCDC7Q96M83 AL353777.1-201ENST00000425552 326 ntBASIC2.49□□□□□ -2.01
CCDC7Q96M83 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC7Q96M83 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC7Q96M83 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms