Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MIR34B-201ENST00000385076 84 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 RNU6-1197P-201ENST00000391183 107 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 EIF4E2P1-201ENST00000393781 255 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS50Q96JG6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VPS50Q96JG6 RPL21P40-201ENST00000428586 483 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 GPM6BP2-201ENST00000432046 144 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.44□□□□□ -1.86
VPS50Q96JG6 AC073063.1-201ENST00000434352 607 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 NDUFB4P6-201ENST00000436819 366 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 GPM6BP1-201ENST00000446387 144 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS50Q96JG6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS50Q96JG6 MTND4P17-201ENST00000470444 350 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 AL135752.1-201ENST00000479477 471 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 RPS15AP34-201ENST00000487776 387 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 AC139453.3-201ENST00000493276 369 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 FGF7P4-201ENST00000509595 295 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 AC104136.1-201ENST00000512969 394 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 RNU6-277P-201ENST00000516272 106 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 Y_RNA.675-201ENST00000516389 149 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 RNU6-1315P-201ENST00000517187 99 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS50Q96JG6 HPRT1P3-201ENST00000539521 576 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 AC011611.1-201ENST00000552179 197 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 AC005668.1-201ENST00000571142 476 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 MIR3672-201ENST00000584290 82 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 RNU1-30P-201ENST00000606575 163 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS50Q96JG6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 AP003355.3-201ENST00000623465 114 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 AC022418.1-201ENST00000624118 445 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 AL732372.2-225ENST00000642124 456 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VPS50Q96JG6 AC007785.2-201ENST00000598627 1916 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 FAM35CP-201ENST00000554755 2470 ntBASIC3.44□□□□□ -1.86
VPS50Q96JG6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS50Q96JG6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS50Q96JG6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS50Q96JG6 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
VPS50Q96JG6 SNORA71.3-201ENST00000362582 128 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 Y_RNA.58-201ENST00000362807 102 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 SNORD3E-201ENST00000362899 217 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 Y_RNA.154-201ENST00000363624 102 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 RNA5SP50-201ENST00000363731 107 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 RNA5SP51-201ENST00000364750 119 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 RNY3P1-201ENST00000365085 102 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 RNY3-201ENST00000365484 102 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS50Q96JG6 RNU6-741P-201ENST00000383889 107 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 Y_RNA.490-201ENST00000384413 102 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
VPS50Q96JG6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS50Q96JG6 RPLP0P7-201ENST00000416050 667 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 AC245291.1-201ENST00000419501 328 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS50Q96JG6 RPL23AP69-201ENST00000431134 458 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 NDUFA5P4-201ENST00000436704 385 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 AC009969.1-201ENST00000438726 172 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 RPL21P23-201ENST00000446654 460 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 RPL37P6-201ENST00000460682 294 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 SNORA14.1-201ENST00000516113 141 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 RNU6-143P-201ENST00000516942 93 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 AP003122.3-201ENST00000526316 255 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 AC084851.1-201ENST00000529105 249 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS50Q96JG6 GLYCAM1-201ENST00000546596 285 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS50Q96JG6 TRAV28-201ENST00000557548 323 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS50Q96JG6 MIR548AC-201ENST00000585049 88 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS50Q96JG6 AC002044.1-201ENST00000606707 158 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 FAM157A-202ENST00000615155 405 ntBASIC3.43□□□□□ -1.86
VPS50Q96JG6 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS50Q96JG6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS50Q96JG6 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS50Q96JG6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS50Q96JG6 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS50Q96JG6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS50Q96JG6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
VPS50Q96JG6 AC006026.1-201ENST00000444025 1803 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS50Q96JG6 MIR30E-201ENST00000362104 92 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 RNA5SP42-201ENST00000364278 115 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 Y_RNA.474-201ENST00000384341 102 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
VPS50Q96JG6 CYCSP4-201ENST00000429682 331 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS50Q96JG6 AC008264.1-201ENST00000447612 367 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS50Q96JG6 AC091179.1-201ENST00000461606 579 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 TRBVA-201ENST00000498804 316 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS50Q96JG6 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS50Q96JG6 SNORA19.2-201ENST00000516013 114 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.42□□□□□ -1.86
VPS50Q96JG6 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS50Q96JG6 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS50Q96JG6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms