Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.71□□□□□ -1.82
FOXRED1Q96CU9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
FOXRED1Q96CU9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FOXRED1Q96CU9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXRED1Q96CU9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 ZNF962P-201ENST00000443465 3140 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 RNU6-227P-201ENST00000362865 103 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 RNU6-78P-201ENST00000362897 107 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 SNORD14.1-201ENST00000365609 90 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 Y_RNA.485-201ENST00000384395 102 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 RNU6-823P-201ENST00000391042 103 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 MIR888-201ENST00000401186 77 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 MTND3P9-201ENST00000429526 346 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 AC011998.1-201ENST00000433403 117 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 RNU1-61P-201ENST00000516107 151 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 RNU6-635P-201ENST00000516651 102 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 CYCSP39-201ENST00000565821 309 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 MIR5696-201ENST00000578474 85 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 MIR5096-201ENST00000583713 70 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 VN1R107P-201ENST00000601784 209 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 AL158827.2-201ENST00000602494 330 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 Z98751.3-201ENST00000604447 521 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 AC124312.5-201ENST00000604451 268 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 AC008962.1-201ENST00000605729 304 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 SNORD58B-201ENST00000607313 66 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 U4.1-201ENST00000620349 87 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 AC138627.2-201ENST00000624202 601 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 AC138305.3-201ENST00000624988 240 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 AL691447.3-201ENST00000635020 330 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 MIR4272-201ENST00000635924 64 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 CUL1P1-201ENST00000509510 2425 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 MTND5P27-201ENST00000428871 1720 ntBASIC3.7□□□□□ -1.82
FOXRED1Q96CU9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 AC066616.2-201ENST00000559334 1481 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 RNU6-595P-201ENST00000363944 107 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 RNU4-42P-201ENST00000364738 142 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 RNU1-73P-201ENST00000383971 164 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 Y_RNA.526-201ENST00000384572 110 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 MIR568-201ENST00000385036 95 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 RPS29P13-201ENST00000402041 169 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 YPEL5P1-201ENST00000419731 367 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 AC007389.2-201ENST00000434630 306 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 RPL23AP49-201ENST00000492925 468 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 UBE2CP3-201ENST00000502715 450 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 MRPS35P2-201ENST00000508242 191 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 AL161670.1-201ENST00000554348 137 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 AL355297.3-201ENST00000604082 446 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 AL110115.1-201ENST00000614396 364 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 AC048347.1-201ENST00000624621 427 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 U2.21-201ENST00000637295 81 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 MAPK10-253ENST00000641010 4072 ntBASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
FOXRED1Q96CU9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
FOXRED1Q96CU9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.68□□□□□ -1.82
FOXRED1Q96CU9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.68□□□□□ -1.82
FOXRED1Q96CU9 RNU6-778P-201ENST00000363269 103 ntBASIC3.68□□□□□ -1.82
FOXRED1Q96CU9 RNU6-527P-201ENST00000363425 104 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms